SahakyanLab
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GenomicPR2SimsWebApp
GenomicPR2SimsWebApp PublicShiny interface and simple ODE-based simulation code for the genomic base composition.
R
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GenomicPR2Simulations
GenomicPR2Simulations PublicPipeline for ODE-driven simulations to explore the genomic compliance of PR-2.
Mathematica
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GenomicContactDynamics
GenomicContactDynamics PublicCode for the analyses and simulations involved in the Genomic Contact Dynamics research.
R
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G4Damage
G4Damage PublicPipeline for cross mapping DNA damage with regard to G-quadruplex structures.
R
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kmeRtone
kmeRtone PublicMulti-purpose and transferrable k-meric enrichment/depletion analysis software.
R
Repositories
- GenomeAssembler_dev Public
Code to simulate the generation of sequencing reads, to de novo assemble a genome, and to calculate breakage propensity scores.
SahakyanLab/GenomeAssembler_dev’s past year of commit activity - DNAFragility_dev Public
Research and development code for DNA breakpoints induced under various conditions.
SahakyanLab/DNAFragility_dev’s past year of commit activity - DNAFragility_ML Public
Development and application of DNA fragility prediction engine based only on sequence-context.
SahakyanLab/DNAFragility_ML’s past year of commit activity - DNAfrAIlib Public
DNA fragility associated k-meric features for genomic sequence-driven machine learning.
SahakyanLab/DNAfrAIlib’s past year of commit activity - GenomicContactDynamics Public
Code for the analyses and simulations involved in the Genomic Contact Dynamics research.
SahakyanLab/GenomicContactDynamics’s past year of commit activity - GenomicPR2Simulations Public
Pipeline for ODE-driven simulations to explore the genomic compliance of PR-2.
SahakyanLab/GenomicPR2Simulations’s past year of commit activity
