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@STOmics

STOmics

Popular repositories

  1. Stereopy Stereopy Public

    A toolkit of spatial transcriptomic analysis.

    Jupyter Notebook 184 64

  2. SAW SAW Public

    HTML 132 34

  3. CellBin CellBin Public

    Tools for generating single-cell gene expression data

    Python 28 2

  4. StereoMMv1 StereoMMv1 Public

    StereoMM is a graph fusion model that can integrate gene expression, histological images, and spatial location. And the information interaction within modalities is strengthened by introducing an a…

    Jupyter Notebook 26 1

  5. ST_BarcodeMap ST_BarcodeMap Public

    C++ 21 7

  6. StereoSiTE StereoSiTE Public

    Spatial transcriptome analysis in python

    Jupyter Notebook 20

Repositories

Showing 10 of 28 repositories
  • CoDi Public
    STOmics/CoDi’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Aug 30, 2024
  • StereoSiTE Public

    Spatial transcriptome analysis in python

    STOmics/StereoSiTE’s past year of commit activity
    Jupyter Notebook 20 GPL-3.0 0 2 0 Updated Aug 29, 2024
  • Stereopy Public

    A toolkit of spatial transcriptomic analysis.

    STOmics/Stereopy’s past year of commit activity
    Jupyter Notebook 184 MIT 64 13 0 Updated Aug 22, 2024
  • CellBin-R Public

    This repository is for CellBin research group

    STOmics/CellBin-R’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Aug 7, 2024
  • cs-benchmark Public

    This repository is for cell segmentation benchmark

    STOmics/cs-benchmark’s past year of commit activity
    0 0 0 0 Updated Aug 6, 2024
  • StereoMMv1 Public

    StereoMM is a graph fusion model that can integrate gene expression, histological images, and spatial location. And the information interaction within modalities is strengthened by introducing an attention mechanism.

    STOmics/StereoMMv1’s past year of commit activity
    Jupyter Notebook 26 1 0 0 Updated Aug 5, 2024
  • EAGS Public

    EAGS:efficient and adaptive Gaussian smoothing

    STOmics/EAGS’s past year of commit activity
    Python 5 MIT 0 0 0 Updated Aug 2, 2024
  • ST-GEARS Public

    A Spatial Transcriptomics Geospatial Profile Recovery System Tool through Anchors

    STOmics/ST-GEARS’s past year of commit activity
    Jupyter Notebook 10 MIT 0 1 0 Updated Jul 30, 2024
  • Spatialign Public

    Spatially Resolved Transcriptomics Integration Algorithm

    STOmics/Spatialign’s past year of commit activity
    Jupyter Notebook 4 MIT 0 1 0 Updated Jul 29, 2024
  • SAW Public
    STOmics/SAW’s past year of commit activity
    HTML 132 GPL-3.0 34 22 3 Updated Jul 22, 2024
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