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  • Jupyter Notebook MIT License Updated Jul 2, 2024
  • Bot to automate finding and posting research papers related to aquatic/marine viruses or bacteriophages

    Python Updated Jun 26, 2024
  • Experimenting on dynamical systems

    Jupyter Notebook MIT License Updated Jan 27, 2024
  • Tutorial and starter codes for Bayesian inference used in computational Biology

    MIT License Updated Jan 17, 2024
  • (Review) Repository for the metapopulation model of a P.a. lung infection

    MATLAB MIT License Updated Dec 7, 2023
  • Create, test and deploy virus-microbe interaction models for community experiments and population time series

    Jupyter Notebook 2 Updated Nov 27, 2023
  • Under the Simons Collaboration on Ocean Processes and Ecology, creating causation networks to understand how biotic and abiotic components interact spatio-temporally

    Jupyter Notebook Updated Nov 17, 2023
  • phamily Public

    A large scale latent variable compartmental model for simulating abundance/population time series of interacting phages and microbes that undergoes lysis in presence of the phages.

    Python 2 MIT License Updated Nov 2, 2023
  • DOE-onestep Public

    Design of experiment to minimize number of observation needed for Bayesian Inference

    MATLAB Updated Jul 14, 2023
  • GOBI-scope Public

    Forked from Mathbiomed/GOBI

    Generalized ODE based inference on SCOPE in silico or in situ time series datasets

    MATLAB Updated Jun 2, 2023
  • The Original Code repository for my Python OOP Series

    Python Updated Jun 7, 2022
  • Updated Dec 21, 2021
  • Find parameters of Langevin equation with out noise, with noise, in water, in complex fluids, using ML and iterative algorithms

    MATLAB 1 Updated Dec 15, 2021
  • mcmcstat Public

    Forked from mjlaine/mcmcstat

    DRAM MCMC toolbox for Matlab

    MATLAB Other Updated Aug 15, 2021
  • This code estimates the entropy production rate by machine learning of trajectory data. The method is based on the thermodynamic uncertainty relation.

    HTML Updated Feb 19, 2021
  • To track the motion of a bacteria or see how it is changing its shape

    Python Updated Nov 27, 2019
  • labview program build around kinesis thorlabs for Optical Tweezer remote control and data acquisition

    C Updated Nov 20, 2019
  • this repository has the contents to create various image filters using simple python code and matrices.

    Python Updated Jun 1, 2018