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@RasmussenLab

RasmussenLab

The Rasmussen group focuses on proteome and genome variation, coding variation and deep learning for integration of genomics, proteomics and clinical data.

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  1. vamb vamb Public

    Variational autoencoder for metagenomic binning

    Python 232 42

  2. MOVE MOVE Public

    MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations

    Jupyter Notebook 60 25

  3. phamb phamb Public

    Downstream processing of VAMB binning for Viral Elucidation

    Python 42 7

  4. pimms pimms Public

    Imputing proteomics data using deep learning models

    Python 12 2

  5. vCentenarian vCentenarian Public

    Repository with supporting code and information for virome analysis of Centenarian metagenomes

    Python 3 3

  6. IntroToML IntroToML Public

    Forked from Center-for-Health-Data-Science/IntroToML

    Machine Learning course at Copenhagen University, Faculty of Health and Medical Sciences, Center for Health Data Science

    Jupyter Notebook 3

Repositories

Showing 10 of 32 repositories
  • pimms Public

    Imputing proteomics data using deep learning models

    RasmussenLab/pimms’s past year of commit activity
    Python 12 GPL-3.0 2 1 0 Updated Jun 28, 2024
  • vamb Public

    Variational autoencoder for metagenomic binning

    RasmussenLab/vamb’s past year of commit activity
    Python 232 MIT 42 30 6 Updated Jun 27, 2024
  • hela_qc_mnt_data Public

    Functionality for processing and analysing HeLa data quality control (QC) and maintenance (MNT) samples processed by MaxQuant

    RasmussenLab/hela_qc_mnt_data’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 0 0 1 Updated Jun 27, 2024
  • MOVE Public

    MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations

    RasmussenLab/MOVE’s past year of commit activity
    Jupyter Notebook 60 MIT 25 9 4 Updated Jun 24, 2024
  • git-tutorial Public Forked from betatim/vscode-binder

    VS Code on Binder

    RasmussenLab/git-tutorial’s past year of commit activity
    Python 0 BSD-3-Clause 62 1 1 Updated Jun 18, 2024
  • njab Public

    Not just another biomarkers: Functionality for biomarker discovery

    RasmussenLab/njab’s past year of commit activity
    Python 0 MIT 1 1 0 Updated Jun 7, 2024
  • CLASTER Public

    Modeling nascent RNA transcription from chromatin landscape and structure

    RasmussenLab/CLASTER’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated May 30, 2024
  • PSYCH-VAE Public
    RasmussenLab/PSYCH-VAE’s past year of commit activity
    Python 0 1 0 0 Updated May 27, 2024
  • taxconverter Public

    Unifies the presentation of taxonomic classifiers output

    RasmussenLab/taxconverter’s past year of commit activity
    Python 1 MIT 0 1 0 Updated May 14, 2024
  • cr2_usage_bot Public

    Send cr2 usage on computerome to a Slack channel.

    RasmussenLab/cr2_usage_bot’s past year of commit activity
    Python 0 0 0 0 Updated May 3, 2024
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