Update r-cmd-check.yml

.github/workflows/r-cmd-check.yml

@@ -1,16 +1,16 @@
-# For help debugging build failures open an issue on the RStudio community with the 'github-actions' tag.
-# https://community.rstudio.com/new-topic?category=Package%20development&tags=github-actions
+# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
+# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
+#
+# NOTE: This workflow is overkill for most R packages and
+# check-standard.yaml is likely a better choice.
+# usethis::use_github_action("check-standard") will install it.
 on:
  push:
- branches:
- - main
- - devel
+ branches: [main, master]
  pull_request:
- branches:
- - main
- - devel
+ branches: [main, master]
 
-name: R CMD Check
+name: R-CMD-check
 
 jobs:
  R-CMD-check:
@@ -22,66 +22,29 @@ jobs:
  fail-fast: false
  matrix:
  config:
- - {os: windows-latest, r: '4.2', repos: 'https://packagemanager.posit.co/cran/2022-12-14/'}
- - {os: ubuntu-20.04, r: '4.2', repos: 'https://packagemanager.posit.co/cran/2022-12-14/'}
-
+ # use 4.1 to check with rtools40's older compiler
+ - {os: windows-latest, r: '4.2'}
+ - {os: ubuntu-latest, r: 'release'}
  env:
- REPOS: ${{ matrix.config.repos }}
- R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
- RSPM: ${{ matrix.config.rspm }}
  GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+ R_KEEP_PKG_SOURCE: yes
 
  steps:
  - uses: actions/checkout@v3
 
+ - uses: r-lib/actions/setup-pandoc@v2
+
  - uses: r-lib/actions/setup-r@v2
  with:
  r-version: ${{ matrix.config.r }}
+ http-user-agent: ${{ matrix.config.http-user-agent }}
+ use-public-rspm: true
 
- - uses: r-lib/actions/setup-pandoc@v2
-
- - name: Query dependencies
- run: |
- install.packages('remotes')
- saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
- writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
- shell: Rscript {0}
-
- - name: Restore R package cache
- if: runner.os != 'Windows'
- uses: actions/cache@v2
+ - uses: r-lib/actions/setup-r-dependencies@v2
  with:
- path: ${{ env.R_LIBS_USER }}
- key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
- restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-
-
- - name: Install system dependencies
- if: runner.os == 'Linux'
- run: |
- while read -r cmd
- do
- eval sudo $cmd
- done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "20.04"))')
- - name: Install dependencies
- run: |
- repos <- Sys.getenv("REPOS")
- if (repos != "") options(repos = repos)
- remotes::install_deps(dependencies = TRUE)
- remotes::install_cran("rcmdcheck")
- devtools::install_github("pharmaverse/envsetup")
- shell: Rscript {0}
-
- - name: Check
- env:
- _R_CHECK_CRAN_INCOMING_REMOTE_: false
- run: |
- options(crayon.enabled = TRUE)
- rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check")
- shell: Rscript {0}
+ extra-packages: any::rcmdcheck
+ needs: check
 
- - name: Upload check results
- if: failure()
- uses: actions/upload-artifact@main
+ - uses: r-lib/actions/check-r-package@v2
  with:
- name: ${{ runner.os }}-r${{ matrix.config.r }}-results
- path: check
+ upload-snapshots: true