minor fix

PengNi · Sep 15, 2022 · a056d23 · a056d23
1 parent 77489a2
commit a056d23
Showing 1 changed file with 3 additions and 2 deletions.
diff --git a/deepsignal_plant/call_modifications.py b/deepsignal_plant/call_modifications.py
@@ -317,8 +317,9 @@ def _read_features_from_fast5s(fast5s, motif_seqs, chrom2len, positions, regioni
  base_signal_lens.append(signal_lens)
  k_signals.append(kmer_base_signals)
  labels.append(f_methy_label)
- features_batches.append((sampleinfo, kmers, base_means, base_stds,
- base_signal_lens, k_signals, labels))
+ if len(sampleinfo) > 0:
+ features_batches.append((sampleinfo, kmers, base_means, base_stds,
+ base_signal_lens, k_signals, labels))
  return features_batches, error