Pavlidis lab
The Pavlidis Lab at the University of British Columbia
Pinned
📊 Gene expression in neuroexpresso database
R
17
1
Genomics data re-analysis
Java
18
6
Marker gene profile estimation method used in NeuroExpresso manuscript
R
12
2
Repositories
Showing 10 of 61 repositories
Gemma
Public
Genomics data re-analysis
PavlidisLab/Gemma’s past year of commit activity
Java
18
Apache-2.0
6
278
29
Updated Jun 22, 2024
gemma.R
Public
An R wrapper for the Gemma RESTful API
PavlidisLab/gemma.R’s past year of commit activity
R
9
Apache-2.0
1
6
0
Updated Jun 21, 2024
rdp
Public
Researcher Gene Registry. Originally developed for the Canadian Rare Disease Models & Mechanisms Network
PavlidisLab/rdp’s past year of commit activity
Java
5
Apache-2.0
6
144
4
Updated Jun 21, 2024
TGEMO
Public
The Gemma Ontology
PavlidisLab/TGEMO’s past year of commit activity
Python
1
0
2
1
Updated Jun 20, 2024
PavlidisLab/GemBrow’s past year of commit activity
Vue
3
Apache-2.0
1
23
2
Updated Jun 20, 2024
rnaseq-pipeline
Public
RNA-seq pipeline for raw sequence alignment and transcript/gene quantification.
PavlidisLab/rnaseq-pipeline’s past year of commit activity
Python
19
Unlicense
4
36
1
Updated Jun 14, 2024
gsec
Public
Reusable implementation of the Spring Security framework for lab projects
PavlidisLab/gsec’s past year of commit activity
Java
0
Apache-2.0
0
2
6
Updated Jun 8, 2024
bioluigi
Public
Reusable and maintained Luigi tasks to incorporate in bioinformatics pipelines
PavlidisLab/bioluigi’s past year of commit activity
Python
9
Apache-2.0
0
6
1
Updated Jun 7, 2024
PavlidisLab/TR_singlecell’s past year of commit activity
R
0
MIT
0
0
0
Updated Jun 1, 2024
gotrack
Public
Web-based system and database that provides access to historical records and trends in the Gene Ontology and GO annotations
PavlidisLab/gotrack’s past year of commit activity
Java
1
0
16
5
Updated May 29, 2024
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