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snv-calling-nf
snv-calling-nf PublicNextflow workflow for SNV calling using GATK4 / MuTect2, CaVEMan / Pindel and Strelka2
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virus-detection-nf
virus-detection-nf PublicNextflow workflow for virus detection, integration site mapping and splice-variant detection.
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sv-calling-nf
sv-calling-nf PublicNextflow workflow for SV calling using delly2, lumpy, manta and BRASS.
Nextflow 2
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battenberg-nf
battenberg-nf PublicNextflow workflow for Battenberg to detect subclonality and copy number in matched NGS data
Nextflow 1
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- virus-detection-nf Public
Nextflow workflow for virus detection, integration site mapping and splice-variant detection.
ObenaufLab/virus-detection-nf’s past year of commit activity - snv-calling-nf Public
Nextflow workflow for SNV calling using GATK4 / MuTect2, CaVEMan / Pindel and Strelka2
ObenaufLab/snv-calling-nf’s past year of commit activity - battenberg-nf Public
Nextflow workflow for Battenberg to detect subclonality and copy number in matched NGS data
ObenaufLab/battenberg-nf’s past year of commit activity
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