Merge pull request #482 from eschnider/patch-1

Segmentation configuration file fix
NifTK · Mar 3, 2020 · 6c61333 · 6c61333
2 parents 7421b01 + 7c414ad
commit 6c61333
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/config/default_multimodal_segmentation_eval.ini b/config/default_multimodal_segmentation_eval.ini
@@ -68,7 +68,6 @@ spatial_window_size = (64, 64, 64)
 [EVALUATION]
 save_csv_dir = ./NiftyNetTestEval
 evaluations = dice,jaccard,false_positive_rate,positive_predictive_values,n_pos_ref,n_pos_seg
-evaluation_units = foreground
 
 
 ############################ custom configuration sections
@@ -82,3 +81,4 @@ weight = T1
 output_prob = False
 num_classes = 5
 label_normalisation = False
+evaluation_units = foreground
diff --git a/demos/unet_histology/config.ini b/demos/unet_histology/config.ini
@@ -51,7 +51,6 @@ dataset_to_infer = inference
 [EVALUATION]
 save_csv_dir = ./eval.csv
 evaluations = dice
-evaluation_units = label
 
 ############################ Application Configuration
 [SEGMENTATION]
@@ -61,3 +60,4 @@ sampler = label
 label_normalisation = False
 output_prob = False
 num_classes = 2
+evaluation_units = label