Scripts for code of DRAMP 2.0 manuscript submitted to Sci Data
The program provides the source code of the DRAMP database. And the program can detect overlapping sequences of antimicrobial peptide databases and pre-process antimicrobial peptide data in the DRAMP database, as well as be applied to all types of single-character peptide sequence processing.
All sequences are available in DRAMP(http:https://dramp.cpu-bioinfor.org/), APD(http:https://aps.unmc.edu/AP/) and CAMP(http:https://www.camp.bicnirrh.res.in/) database.
./overlap contains a python script that calculate overlapping sequences of DRAMP, APD and CAMP database.
- Run overlap_sequence.py to capture overlapping sequences. Place some sequences from several databases in the first column of corresponding .csv file. It will output overlapping sequences in .csv format.