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1. Drugstance Drugstance Public

   Calculate the semantic distance between drugs based on their indications using information theory.

   Python 1

2. RxRx19aDLBatchCorrect RxRx19aDLBatchCorrect Public

   Python pipeline to identify and remove batch effects in the deep learning embeddings of the RxRx19a dataset and better identify potentially effective compounds against SARS-CoV-2

   Python 1

3. celluster celluster Public

   Consensus clustering from multiple methods used in MCMICRO to cluster cell types.

   Python 5 2

4. ProteoHist ProteoHist Public

   An AI method for predicting tumor protein expression from H&E histopathology slides

   Jupyter Notebook

5. kauwelab/cubap kauwelab/cubap Public

   Codon Usage Biases Across Populations

   HTML 1

6. kauwelab/rampAtlas kauwelab/rampAtlas Public

   Code used to retrieve, organize, and analyze data for the Ramp Atlas

   C# 2