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Showing results

A simple neural network for calling het-/hom-variants from alignments of single molecule reads to a reference

Jupyter Notebook 58 13 Updated Apr 27, 2018

Toolkit for analyzing genetics data from admixed populations

Python 22 5 Updated Feb 14, 2024

A massively parallel, high-level programming language

Rust 16,880 411 Updated Jul 22, 2024

A simple way to calibrate your neural network.

Python 1,061 158 Updated Aug 24, 2021

A Set of R Tools for Splitting up Chromosomes into Regions of High and Low Recombination

Jupyter Notebook 1 Updated Apr 28, 2024

Frequently used commands in Bioinformatics

18 3 Updated Jul 10, 2024

GRUD is a genotype imputation based on deep learning algorithms

Python 6 1 Updated Jul 3, 2024

Split Transformer Impute source code

Jupyter Notebook 10 2 Updated Apr 30, 2024

CUDA-based KING relatedness estimation

Cuda 3 Updated Oct 28, 2022

The Book of Statistical Proofs

HTML 277 56 Updated Jul 18, 2024

Smart and Accurate Polishing of Phase Haplotypes Integrating Read Enhancements (SAPPHIRE)

C++ 8 1 Updated May 7, 2024
SCSS 72 41 Updated Jan 17, 2024

🌿 🍞 Large scale ancestry inference from PCA data

R 20 2 Updated May 2, 2023

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

JavaScript 11,148 40,330 Updated Jul 23, 2024

Script used to identify de novo variants from sequencing data.

Python 12 3 Updated Mar 2, 2017

Carbon Language's main repository: documents, design, implementation, and related tools. (NOTE: Carbon Language is experimental; see README)

C++ 32,265 1,468 Updated Jul 24, 2024
Python 2 Updated Apr 20, 2023

Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls

HTML 184 46 Updated Mar 19, 2021