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Support variable degree of freedom, better documentation, added license #64

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merged 9 commits into from
Feb 8, 2019

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@linqiaozhi linqiaozhi commented Feb 8, 2019

-Decreasing the degree of freedom (df) of the t-distribution reveals fine structure that is not visible in standard t-SNE. This PR adds a df parameter for that purpose. Preprint will be forthcoming.
-Added documentation to Python and R wrappers
-Added License
-Binary checks if the wrapper version matches the binary version
-Upgrade to v1.1.0. Wrappers will all work the same (with the exception of the additional df parameter), but the format of the file read by the executable will be different.

linqiaozhi and others added 9 commits February 7, 2019 19:06
-Fixed a mistake in the R wrapper support of returning the losses
-Added return_loss support. Added nthreads support.
-Removed duplicate pows

Co-authored-by: dkobak <[email protected]>
…MATLAB wrapper that was preventing it from running, introduced in KlugerLab#63
…Python code. Added df!=1 to the Python example notebook
Added LICENSE.txt and removed the 1D t-SNE heatmaps wrapper from this
code (t-SNE heatmaps has its own repository at
https://github.com/KlugerLab/t-SNE-Heatmaps).
@linqiaozhi linqiaozhi merged commit 1647095 into KlugerLab:master Feb 8, 2019
@linqiaozhi linqiaozhi mentioned this pull request Feb 8, 2019
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2 participants