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Moved docstrings for *fft* functions from helpdb.jl to base/dft.jl an…
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…d base/fft/FFTW.jl
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nkottary committed Sep 15, 2015
1 parent 897c6e9 commit 0479ea0
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233 changes: 233 additions & 0 deletions base/dft.jl
Original file line number Diff line number Diff line change
Expand Up @@ -39,6 +39,170 @@ for f in (:fft, :bfft, :ifft, :fft!, :bfft!, :ifft!, :rfft)
end
end

doc"""
```rst
.. plan_ifft(A [, dims]; flags=FFTW.ESTIMATE; timelimit=Inf)
Same as :func:`plan_fft`, but produces a plan that performs inverse transforms
:func:`ifft`.
```
"""
plan_ifft

doc"""
```rst
.. plan_ifft!(A [, dims]; flags=FFTW.ESTIMATE; timelimit=Inf)
Same as :func:`plan_ifft`, but operates in-place on ``A``.
```
"""
plan_ifft!

doc"""
```rst
.. plan_bfft!(A [, dims]; flags=FFTW.ESTIMATE; timelimit=Inf)
Same as :func:`plan_bfft`, but operates in-place on ``A``.
```
"""
plan_bfft!

doc"""
```rst
.. plan_bfft(A [, dims]; flags=FFTW.ESTIMATE; timelimit=Inf)
Same as :func:`plan_fft`, but produces a plan that performs an unnormalized
backwards transform :func:`bfft`.
```
"""
plan_bfft

doc"""
```rst
.. plan_fft(A [, dims]; flags=FFTW.ESTIMATE; timelimit=Inf)
Pre-plan an optimized FFT along given dimensions (``dims``) of arrays
matching the shape and type of ``A``. (The first two arguments have
the same meaning as for :func:`fft`.) Returns an object ``P`` which
represents the linear operator computed by the FFT, and which contains
all of the information needed to compute ``fft(A, dims)`` quickly.
To apply ``P`` to an array ``A``, use ``P * A``; in general, the
syntax for applying plans is much like that of matrices. (A plan
can only be applied to arrays of the same size as the ``A`` for
which the plan was created.) You can also apply a plan with a
preallocated output array ``Â`` by calling ``A_mul_B!(Â, plan,
A)``. You can compute the inverse-transform plan by ``inv(P)`` and
apply the inverse plan with ``P \ Â`` (the inverse plan is cached
and reused for subsequent calls to ``inv`` or ``\``), and apply the
inverse plan to a pre-allocated output array ``A`` with
``A_ldiv_B!(A, P, Â)``.
The ``flags`` argument is a bitwise-or of FFTW planner flags, defaulting
to ``FFTW.ESTIMATE``. e.g. passing ``FFTW.MEASURE`` or ``FFTW.PATIENT``
will instead spend several seconds (or more) benchmarking different
possible FFT algorithms and picking the fastest one; see the FFTW manual
for more information on planner flags. The optional ``timelimit`` argument
specifies a rough upper bound on the allowed planning time, in seconds.
Passing ``FFTW.MEASURE`` or ``FFTW.PATIENT`` may cause the input array ``A``
to be overwritten with zeros during plan creation.
:func:`plan_fft!` is the same as :func:`plan_fft` but creates a plan
that operates in-place on its argument (which must be an array of
complex floating-point numbers). :func:`plan_ifft` and so on
are similar but produce plans that perform the equivalent of
the inverse transforms :func:`ifft` and so on.
```
"""
plan_fft

doc"""
```rst
.. plan_fft!(A [, dims]; flags=FFTW.ESTIMATE; timelimit=Inf)
Same as :func:`plan_fft`, but operates in-place on ``A``.
```
"""
plan_fft!

doc"""
```rst
.. rfft(A [, dims])
Multidimensional FFT of a real array ``A``, exploiting the fact that
the transform has conjugate symmetry in order to save roughly half
the computational time and storage costs compared with :func:`fft`.
If ``A`` has size ``(n_1, ..., n_d)``, the result has size
``(div(n_1,2)+1, ..., n_d)``.
The optional ``dims`` argument specifies an iterable subset of one or
more dimensions of ``A`` to transform, similar to :func:`fft`. Instead
of (roughly) halving the first dimension of ``A`` in the result, the
``dims[1]`` dimension is (roughly) halved in the same way.
```
"""
rfft

doc"""
```rst
.. ifft!(A [, dims])
Same as :func:`ifft`, but operates in-place on ``A``.
```
"""
ifft!

doc"""
ifft(A [, dims])
Multidimensional inverse FFT.
A one-dimensional inverse FFT computes
$$\operatorname{IDFT}(A)[k] = \frac{1}{\operatorname{length}(A)}
\sum_{n=1}^{\operatorname{length}(A)} \exp\left(+i\frac{2\pi (n-1)(k-1)}
{\operatorname{length}(A)} \right) A[n].$$
A multidimensional inverse FFT simply performs this operation along each transformed dimension of `A`.
"""
ifft

doc"""
```rst
.. fft!(A [, dims])
Same as :func:`fft`, but operates in-place on ``A``,
which must be an array of complex floating-point numbers.
```
"""
fft!

doc"""
```rst
.. bfft(A [, dims])
Similar to :func:`ifft`, but computes an unnormalized inverse (backward)
transform, which must be divided by the product of the sizes of the
transformed dimensions in order to obtain the inverse. (This is slightly
more efficient than :func:`ifft` because it omits a scaling step, which in
some applications can be combined with other computational steps elsewhere.)
.. math::
\operatorname{BDFT}(A)[k] = \operatorname{length}(A) \operatorname{IDFT}(A)[k]
```
"""
bfft

doc"""
```rst
.. bfft!(A [, dims])
Same as :func:`bfft`, but operates in-place on ``A``.
```
"""
bfft!

# promote to a complex floating-point type (out-of-place only),
# so implementations only need Complex{Float} methods
for f in (:fft, :bfft, :ifft)
Expand Down Expand Up @@ -142,6 +306,36 @@ for f in (:brfft, :irfft)
end
end

doc"""
```rst
.. irfft(A, d [, dims])
Inverse of :func:`rfft`: for a complex array ``A``, gives the
corresponding real array whose FFT yields ``A`` in the first half.
As for :func:`rfft`, ``dims`` is an optional subset of dimensions
to transform, defaulting to ``1:ndims(A)``.
``d`` is the length of the transformed real array along the ``dims[1]``
dimension, which must satisfy ``div(d,2)+1 == size(A,dims[1])``.
(This parameter cannot be inferred from ``size(A)`` since both
``2*size(A,dims[1])-2`` as well as ``2*size(A,dims[1])-1`` are valid sizes
for the transformed real array.)
```
"""
irfft

doc"""
```rst
.. brfft(A, d [, dims])
Similar to :func:`irfft` but computes an unnormalized inverse transform
(similar to :func:`bfft`), which must be divided by the product
of the sizes of the transformed dimensions (of the real output array)
in order to obtain the inverse transform.
```
"""
brfft

function rfft_output_size(x::AbstractArray, region)
d1 = first(region)
osize = [size(x)...]
Expand All @@ -161,26 +355,65 @@ plan_irfft{T}(x::AbstractArray{Complex{T}}, d::Integer, region; kws...) =
ScaledPlan(plan_brfft(x, d, region; kws...),
normalization(T, brfft_output_size(x, d, region), region))

doc"""
```rst
.. plan_irfft(A, d [, dims]; flags=FFTW.ESTIMATE; timelimit=Inf)
Pre-plan an optimized inverse real-input FFT, similar to :func:`plan_rfft`
except for :func:`irfft` and :func:`brfft`, respectively. The first
three arguments have the same meaning as for :func:`irfft`.
```
"""
plan_irfft

##############################################################################

export fftshift, ifftshift

fftshift(x) = circshift(x, div([size(x)...],2))

doc"""
fftshift(x)
Swap the first and second halves of each dimension of `x`.
"""
fftshift(x)

function fftshift(x,dim)
s = zeros(Int,ndims(x))
s[dim] = div(size(x,dim),2)
circshift(x, s)
end

doc"""
fftshift(x,dim)
Swap the first and second halves of the given dimension of array `x`.
"""
fftshift(x,dim)

ifftshift(x) = circshift(x, div([size(x)...],-2))

doc"""
ifftshift(x)
Undoes the effect of `fftshift`.
"""
ifftshift

function ifftshift(x,dim)
s = zeros(Int,ndims(x))
s[dim] = -div(size(x,dim),2)
circshift(x, s)
end

doc"""
ifftshift(x, [dim])
Undoes the effect of `fftshift`.
"""
ifftshift

##############################################################################

# FFTW module (may move to an external package at some point):
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