[pre-commit.ci] auto fixes from pre-commit.com hooks #3159
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name: masci-tools | |
on: [push, pull_request, workflow_call] | |
jobs: | |
docs: | |
runs-on: ubuntu-latest | |
strategy: | |
matrix: | |
include: | |
- name: docs | |
sphinx-options: '' | |
allow-failure: false | |
- name: docs-nitpicky | |
sphinx-options: '-nW' | |
allow-failure: true | |
name: ${{ matrix.name }} | |
continue-on-error: ${{ matrix.allow-failure }} | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Set up Python 3.10 | |
uses: actions/[email protected] | |
with: | |
python-version: '3.10' | |
- name: Cache python dependencies | |
id: cache-pip | |
uses: actions/[email protected] | |
with: | |
path: ~/.cache/pip | |
key: pip-docs-${{ hashFiles('**/pyproject.toml') }} | |
restore-keys: | | |
pip-docs- | |
- name: Install python dependencies | |
run: | | |
pip install -e .[docs] | |
- name: Install Latex compiler | |
run: | | |
sudo apt-get update | |
sudo apt-get install -y latexmk dvipng texlive-latex-recommended texlive-latex-extra texlive-fonts-recommended | |
- name: Build documentation | |
env: | |
READTHEDOCS: 'True' | |
SPHINXOPTS: ${{ matrix.sphinx-options }} | |
run: | | |
make -C docs html | |
pre-commit: | |
runs-on: ubuntu-latest | |
timeout-minutes: 30 | |
strategy: | |
matrix: | |
include: | |
- name: pre-commit-errors | |
skip-hooks: pylint-warnings | |
allow-failure: false | |
- name: pre-commit-warnings | |
skip-hooks: pylint-errors | |
allow-failure: true | |
name: ${{ matrix.name }} | |
continue-on-error: ${{ matrix.allow-failure }} | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Cache python dependencies | |
id: cache-pip | |
uses: actions/[email protected] | |
with: | |
path: ~/.cache/pip | |
key: pip-pre-commit-${{ hashFiles('**/pyproject.toml') }} | |
restore-keys: | | |
pip-pre-commit- | |
- name: Set up Python 3.8 | |
uses: actions/[email protected] | |
with: | |
python-version: 3.8 | |
- name: Install python dependencies | |
run: | | |
pip install .[pre-commit,bokeh-plots] | |
pip freeze | |
- name: Run pre-commit | |
run: | | |
SKIP=${{ matrix.skip-hooks }} pre-commit run --all-files || (git status --short; git diff ; exit 1) | |
tests: | |
runs-on: ubuntu-latest | |
timeout-minutes: 30 | |
strategy: | |
matrix: | |
python-version: ['3.11','3.10','3.9', '3.8'] | |
experimental: [false] | |
extra-dependencies: ['testing,bokeh-plots,cmdline-extras'] | |
pytest-cmdline: [""] | |
bokeh-version: ['bokeh==3.0.3'] | |
mpl-version: ['matplotlib==3.6.3'] | |
add-name: [''] | |
include: | |
- python-version: '3.7' | |
experimental: false | |
extra-dependencies: 'testing,bokeh-plots' | |
pytest-cmdline: '-o addopts="--cov=masci_tools --cov=tests --cov-report xml"' | |
bokeh-version: 'bokeh==2.4.3' | |
mpl-version: 'matplotlib==3.5.3' | |
add-name: '' | |
- python-version: '3.10' | |
experimental: true | |
extra-dependencies: 'testing,bokeh-plots,cmdline-extras' | |
bokeh-version: 'bokeh' | |
mpl-version: 'matplotlib' | |
add-name: '-latest-bokeh-mpl' | |
fail-fast: false | |
name: tests-python-${{ matrix.python-version }}${{ matrix.add-name }} | |
continue-on-error: ${{ matrix.experimental }} | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Cache python dependencies | |
id: cache-pip | |
uses: actions/[email protected] | |
with: | |
path: ~/.cache/pip | |
key: pip-${{ matrix.python-version }}${{ matrix.add-name }}-tests-${{ hashFiles('**/pyproject.toml') }} | |
restore-keys: | | |
pip-${{ matrix.python-version }}${{ matrix.add-name }}-tests | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/[email protected] | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install Build dependecies (for experimental builds) | |
if: ${{ matrix.experimental }} | |
run: | | |
sudo apt-get update | |
sudo apt-get install -y libxml2-dev libxslt-dev libhdf5-serial-dev libopenblas-dev | |
pip install --upgrade pip setuptools wheel | |
pip install --upgrade cython | |
pip list | |
- name: Install python dependencies | |
run: | | |
pip install -e .[${{ matrix.extra-dependencies }}] | |
pip install pyhull | |
pip install ${{ matrix.bokeh-version }} | |
pip install ${{ matrix.mpl-version }} | |
- name: Run pytest | |
run: pytest ${{ matrix.pytest-cmdline }} | |
- name: Upload to Codecov | |
uses: codecov/codecov-action@v3 | |
- uses: actions/upload-artifact@v3 | |
if: failure() | |
with: | |
name: matplotlib-comparison-${{ matrix.python-version }}${{ matrix.add-name }} | |
path: mpl-results |