Fixing pre-commit errors #3149
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| name: masci-tools | |
| on: [push, pull_request, workflow_call] | |
| jobs: | |
| docs: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| include: | |
| - name: docs | |
| sphinx-options: '' | |
| allow-failure: false | |
| - name: docs-nitpicky | |
| sphinx-options: '-nW' | |
| allow-failure: true | |
| name: ${{ matrix.name }} | |
| continue-on-error: ${{ matrix.allow-failure }} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python 3.10 | |
| uses: actions/[email protected] | |
| with: | |
| python-version: '3.10' | |
| - name: Cache python dependencies | |
| id: cache-pip | |
| uses: actions/[email protected] | |
| with: | |
| path: ~/.cache/pip | |
| key: pip-docs-${{ hashFiles('**/pyproject.toml') }} | |
| restore-keys: | | |
| pip-docs- | |
| - name: Install python dependencies | |
| run: | | |
| pip install -e .[docs] | |
| - name: Install Latex compiler | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y latexmk dvipng texlive-latex-recommended texlive-latex-extra texlive-fonts-recommended | |
| - name: Build documentation | |
| env: | |
| READTHEDOCS: 'True' | |
| SPHINXOPTS: ${{ matrix.sphinx-options }} | |
| run: | | |
| make -C docs html | |
| pre-commit: | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 30 | |
| strategy: | |
| matrix: | |
| include: | |
| - name: pre-commit-errors | |
| skip-hooks: pylint-warnings | |
| allow-failure: false | |
| - name: pre-commit-warnings | |
| skip-hooks: pylint-errors | |
| allow-failure: true | |
| name: ${{ matrix.name }} | |
| continue-on-error: ${{ matrix.allow-failure }} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Cache python dependencies | |
| id: cache-pip | |
| uses: actions/[email protected] | |
| with: | |
| path: ~/.cache/pip | |
| key: pip-pre-commit-${{ hashFiles('**/pyproject.toml') }} | |
| restore-keys: | | |
| pip-pre-commit- | |
| - name: Set up Python 3.8 | |
| uses: actions/[email protected] | |
| with: | |
| python-version: 3.8 | |
| - name: Install python dependencies | |
| run: | | |
| pip install .[pre-commit,bokeh-plots] | |
| pip freeze | |
| - name: Run pre-commit | |
| run: | | |
| SKIP=${{ matrix.skip-hooks }} pre-commit run --all-files || (git status --short; git diff ; exit 1) | |
| tests: | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 30 | |
| strategy: | |
| matrix: | |
| python-version: ['3.11','3.10','3.9', '3.8'] | |
| experimental: [false] | |
| extra-dependencies: ['testing,bokeh-plots,cmdline-extras'] | |
| pytest-cmdline: [""] | |
| bokeh-version: ['bokeh==3.0.3'] | |
| mpl-version: ['matplotlib==3.6.3'] | |
| add-name: [''] | |
| include: | |
| - python-version: '3.7' | |
| experimental: false | |
| extra-dependencies: 'testing,bokeh-plots' | |
| pytest-cmdline: '-o addopts="--cov=masci_tools --cov=tests --cov-report xml"' | |
| bokeh-version: 'bokeh==2.4.3' | |
| mpl-version: 'matplotlib==3.5.3' | |
| add-name: '' | |
| - python-version: '3.10' | |
| experimental: true | |
| extra-dependencies: 'testing,bokeh-plots,cmdline-extras' | |
| bokeh-version: 'bokeh' | |
| mpl-version: 'matplotlib' | |
| add-name: '-latest-bokeh-mpl' | |
| fail-fast: false | |
| name: tests-python-${{ matrix.python-version }}${{ matrix.add-name }} | |
| continue-on-error: ${{ matrix.experimental }} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Cache python dependencies | |
| id: cache-pip | |
| uses: actions/[email protected] | |
| with: | |
| path: ~/.cache/pip | |
| key: pip-${{ matrix.python-version }}${{ matrix.add-name }}-tests-${{ hashFiles('**/pyproject.toml') }} | |
| restore-keys: | | |
| pip-${{ matrix.python-version }}${{ matrix.add-name }}-tests | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/[email protected] | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Build dependecies (for experimental builds) | |
| if: ${{ matrix.experimental }} | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y libxml2-dev libxslt-dev libhdf5-serial-dev libopenblas-dev | |
| pip install --upgrade pip setuptools wheel | |
| pip install --upgrade cython | |
| pip list | |
| - name: Install python dependencies | |
| run: | | |
| pip install -e .[${{ matrix.extra-dependencies }}] | |
| pip install pyhull | |
| pip install ${{ matrix.bokeh-version }} | |
| pip install ${{ matrix.mpl-version }} | |
| - name: Run pytest | |
| run: pytest ${{ matrix.pytest-cmdline }} | |
| - name: Upload to Codecov | |
| uses: codecov/codecov-action@v3 | |
| - uses: actions/upload-artifact@v3 | |
| if: failure() | |
| with: | |
| name: matplotlib-comparison-${{ matrix.python-version }}${{ matrix.add-name }} | |
| path: mpl-results |