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Given files with sequences containing signal peptides and sequences not containing signal peptides, multiple classifiers were tested to see which performs best in the classification of signal peptide sequences.

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JoshuaKoopmans/SignalPeptideClassifier

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SignalPeptideClassifier

Group 10

Members: Joshua Koopmans, Michelle de Groot, Thijs Weenink

Presentation in week 6 (19 March 2020)

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Running the script

  • First clone this repository: git clone https://github.com/JoshuaKoopmans/SignalPeptideClassifier/
  • Before running the script, install the required dependecies by executing the following command:
    pip install -r requirements.txt
  • Finally, run the script: python3 classifiers/classifier.py

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Given files with sequences containing signal peptides and sequences not containing signal peptides, multiple classifiers were tested to see which performs best in the classification of signal peptide sequences.

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