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1. log.bio log.bio Public

   Log command line events to a graph database :)

   Python 13 2

2. pybam pybam Public

   Very simple, pure python, BAM file reader

   Python 79 32

3. ACGTrie ACGTrie Public

   A custom Numpy Trie for storing counts of sequences

   Python 8

4. SeQC SeQC Public

   SQL databases from BAM/SAM files with a focus on QC.

   Python 2 2

5. uq uq Public

   Encode FASTQ files to be much smaller, both compressed and uncompressed.

   Python 7 1