Skip to content

CEST MRI analysis using multi-pool Lorentzian fitting (MPLF)

License

Notifications You must be signed in to change notification settings

JianpanHuang/CEST-MPLF

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

47 Commits
 
 
 
 
 
 
 
 
 
 

Repository files navigation

CEST-MPLF

CEST processing using multipool Lorentzian fitting (MPLF) with inverse Z-spectrum analysis

Author: Jianpan Huang

Email: [email protected]

Affiliation: Department of Diagnostic Radiology, The University of Hong Kong, Hong Kong, China

The demo data is a simulation data created using 5-pool Bloch-McConnell equation with amide fraction varied as 0.0009009, 0.00090092, 0.00090093, 0.0009009*4. Other parameters remained the same. Therefore, we can see a gradient change in amide (3.5 ppm) map, but not in other CEST maps below.

You can change the data to your own CEST data, which must include CEST images (img), frequency offsets (offs) and ROI (roi).

After running the code, you will see the following fitting process and results (In this case, only the amide concentration was changed, rNOE and MT concentrations remained constant in the four tubes.):

image

If you use the code, please consider citing the references:

[1] Huang J, Lai J H C, Tse K H, et al. Deep neural network based CEST and AREX processing: Application in imaging a model of Alzheimer’s disease at 3 T. Magnetic Resonance in Medicine, 2022, 87(3): 1529-1545.

About

CEST MRI analysis using multi-pool Lorentzian fitting (MPLF)

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages