https://github.com/JeffFessler/MIRT.jl
This is a collection of tools for image reconstruction in the open-source Julia language.
Currently it contains a limited collection of the tools from the Matlab version of MIRT, but this collection will grow over time.
This software was developed at the University of Michigan by Jeff Fessler and his group, with valuable contributions from the Julia community.
For detailed installation instructions, see:
- doc/start.md for conventional Julia
- doc/start-pro.md for JuliaPro
This package is registered in the
General
registry,
so you can install at the REPL with ] add MIRT
.
For development,
use the dev
command in Julia's package manager,
or
git clone https://github.com/JeffFessler/MIRT.jl
You can test drive some jupyter notebooks in your browser without installing any local software by using the free service at https://mybinder.org/ through the links at the companion demonstration repository
This package includes some tools from https://gitlab.eecs.umich.edu/michigan-fast-optimization
For additional reproducible research code, see http:https://web.eecs.umich.edu/~fessler/irt/reproduce
Current version is tested with "latest" stable version of Julia (currently 1.8.3). Older tagged versions should work with older Julia versions.
- JuliaImageRecon growing collection of image reconstruction packages
- LinearMapsAA is central to how imaging system models are used here.
Early versions of MIRT.jl
attempted to house many methods
under one roof.
More recently,
the methods are being isolated
into smaller component packages at
JuliaImageRecon.
A similar evolution happened with Images/Images.jl and it is likely that MIRT will evolve to be an "umbrella package" that exports a set of packages that are useful for image reconstruction.
As of v0.15
, the following functions are deprecated:
old | new | see |
---|---|---|
jim |
MIRTjim.jim |
MIRTjim.jl |
prompt |
MIRTjim.prompt |
|
fld_read |
FileIO.load |
AVSfldIO.jl |
fld_write |
FileIO.save |
FileIO.jl |
ndgrid |
LazyGrids.ndgrid |
LazyGrids.jl |
image_geom |
ImageGeoms.ImageGeom |
ImageGeoms.jl |
ellipse_im |
ImagePhantoms.phantom |
ImagePhantoms.jl |
ellipse_sino |
ImagePhantoms.radon |
ImagePhantoms.jl |
mri_objects |
ImagePhantoms.spectrum |
ImagePhantoms.jl |
sino_geom |
Sinograms.RayGeom |
Sinograms.jl |