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pyPESTO v0.3.0

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@PaulJonasJost PaulJonasJost released this 02 May 14:39
· 268 commits to main since this release
27a48d2

New functionalities compared to 0.2.0:

  • New supported data types for parameter estimation:
    • ordinal data
    • censored data
    • unbounded parameter optimization
  • New optimization approaches:
    • Hierarchical optimization
    • Spline approximation
  • New optimizers: CMA-ES, Enhanced Scatter Search, Fides, NLopt, SACESS, SciPy Differential Evolution
  • New samplers: Emcee, Dynesty, Pymc v4
  • New Objectives: Aesara objective, Julia objective, Jax objective
  • Ensemble analysis
  • Model selection
  • Predictions
  • Hdf5 Storage

Not supported functionalities and versions compared to 0.2.0:

  • Removed Python 3.8 and older support
  • Pymc (v3)
  • Removed Theano objective
  • Changed parameter indexing from boolean to int in profiling routines