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single cell to pathway

R 6 Updated Aug 10, 2024
R 1 Updated Aug 3, 2024

Visualizing sequence break point

R 7 Updated Jul 20, 2024

A repository as a discussion place for extending the ggplot2 R package

JavaScript 48 Updated Aug 23, 2024

Tutorial for Learning 'ggtree'

Makefile 6 Updated Jul 18, 2024

A book created by xiaolai with the help of ChatGPT and its TTS

Jupyter Notebook 902 112 Updated Jun 26, 2024

A generative speech model for daily dialogue.

Python 29,622 3,229 Updated Aug 25, 2024

omics data analysis using clusterProfiler ;)

R 9 8 Updated Jun 6, 2024

🕸️Exploring phylomorphospace using 'ggtree'

R 5 2 Updated May 15, 2024

Simple GO Enrichment Analysis

R 4 Updated Feb 12, 2024

AMRFinderPlus - Identify AMR genes and point mutations, and virulence and stress resistance genes in assembled bacterial nucleotide and protein sequence.

C++ 258 37 Updated Aug 17, 2024

Discover and annotate the virome

Python 28 1 Updated Apr 10, 2024

Translate Words or Sentences via Online Translators

R 44 6 Updated Aug 21, 2024

🚀 Level up your GitHub profile readme with customizable cards including LOC statistics!

Python 10,403 78 Updated Jun 3, 2024

A template for creating modular shiny applications that meet academic standards and are reproducible

R 16 4 Updated Aug 1, 2024

⏭️ Small coding tasks that enable you to participate in our development

33 3 Updated Nov 21, 2023

ultrafast genome querying and taxonomic profiling for metagenomic samples by abundance-corrected minhash.

Rust 130 6 Updated Aug 1, 2024

Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.

R 88 6 Updated Jul 24, 2024

Creating composite plot using 'aplot'

R 8 4 Updated Jun 17, 2024

tools and notes for spatial omics

204 43 Updated Apr 1, 2024

Online R learning for applied statistics

476 96 Updated Jul 11, 2024

A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter) and mouse deconvolution methods

R 435 101 Updated Aug 5, 2024

R package for performing 2-sample MR using MR-Base database

R 409 174 Updated Aug 21, 2024

An interactive explorer for single-cell transcriptomics data

JavaScript 611 116 Updated Aug 23, 2024

🔬 Path to a free self-taught education in Bioinformatics!

5,302 889 Updated Apr 8, 2024

Visualising single-cell trajectories, including comparisons between two models 📈

R 29 5 Updated Dec 9, 2021

🧠 Visualizing Single Cell and Spatial Transcriptomics

R 39 8 Updated Aug 16, 2024

Functions to simplify and standardise antimicrobial resistance (AMR) data analysis and to work with microbial and antimicrobial properties by using evidence-based methods, as described in https://d…

R 83 12 Updated Jul 19, 2024

Friends don't let friends make certain types of data visualization - What are they and why are they bad.

R 6,250 223 Updated Jul 11, 2024

Drawing 'dendrogram' using 'ggtree'

R 12 3 Updated May 15, 2024
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