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WIP: Debug gdal_nn.sh #4540

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WIP: Debug gdal_nn.sh #4540

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@seisman seisman commented Dec 4, 2020

Description of proposed changes

Fixes #

Reminders

  • Make sure that your code follows our style. Use the other functions/files as a basis.
  • Add tests for new features or tests that would have caught the bug that you're fixing.
  • Describe changes to function behavior and arguments in a comment below the function declaration.
  • If adding new functionality, add a detailed description to the documentation and/or an example.

@GenericMappingTools GenericMappingTools deleted a comment from codecov-io Dec 4, 2020
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seisman commented Dec 4, 2020

@PaulWessel @joa-quim Here are the debugging messages for gdal_nn.sh test, which fails on Linux and Windows. Hopefully it's useful for you.

1/1 Test #423: test/grdgdal/gdal_nn.sh ..........***Failed    0.65 sec
Set GMT_SESSION_NAME = 9705
gmtset (gmtlib_free_tmp_arrays): tried to free unallocated memory
gmt [DEBUG]: Exit:  gmt_reload_settings
gmt [DEBUG]: Enter: gmtlib_plot_C_format
gmt [DEBUG]: Exit:  gmtlib_plot_C_format
gmt [DEBUG]: Enter: gmtinit_get_history
gmt [DEBUG]: Initialize FFTW with 2 threads.
gmt [DEBUG]: GMT_Create_Session initialized GMT structure
gmt [DEBUG]: Loading core GMT shared library: libgmt.so
gmt [DEBUG]: Shared Library # 0 (core). Path = libgmt.so
gmt [DEBUG]: Loading GMT plugins from: /home/runner/work/gmt/gmt/build/src/plugins
gmt [DEBUG]: Shared Library # 1 (supplements). Path = /home/runner/work/gmt/gmt/build/src/plugins/supplements.so
gmt [DEBUG]: Revised options: -Ccategorical -T0/10/1
gmt (gmtlib_free_tmp_arrays): tried to free unallocated memory
makecpt [DEBUG]: Look for file 0/10/1 in /home/runner/.gmt
makecpt [DEBUG]: Look for file 0/10/1 in /home/runner/work/gmt/gmt/test/grdgdal
makecpt [DEBUG]: Look for file 0/10/1 in /home/runner/.gmt/cache
makecpt [DEBUG]: Look for file 0/10/1 in /home/runner/.gmt/server
makecpt [INFORMATION]: Prepare CPT via the master file categorical
makecpt [DEBUG]: GMT: 0. Will try to find subdir=cpt stem = categorical suffix=.cpt
makecpt [DEBUG]: GMT: 1. gmt_getsharepath trying current dir
makecpt [DEBUG]: GMT: 2. gmt_getsharepath trying USERDIR /home/runner/.gmt
makecpt [DEBUG]: GMT: 3. gmt_getsharepath trying USERDIR subdir /home/runner/.gmt/cpt
makecpt [DEBUG]: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /home/runner/work/gmt/gmt/share/cpt
makecpt [DEBUG]: Given full path to file /home/runner/work/gmt/gmt/share/cpt/categorical.cpt
makecpt [DEBUG]: Found readable file /home/runner/work/gmt/gmt/share/cpt/categorical.cpt
makecpt [DEBUG]: Object ID 0 : Registered CPT File /home/runner/work/gmt/gmt/share/cpt/categorical.cpt as an Input resource with geometry Volume [n_objects = 1]
makecpt [DEBUG]: gmtapi_begin_io: Input resource access is now enabled [container]
makecpt [DEBUG]: gmtapi_import_palette: Passed ID = 0 and mode = 0
makecpt [INFORMATION]: Reading CPT from File /home/runner/work/gmt/gmt/share/cpt/categorical.cpt
makecpt [DEBUG]: Reading CPT from /home/runner/work/gmt/gmt/share/cpt/categorical.cpt
makecpt [DEBUG]: GMT_End_IO: Input resource access is now disabled
makecpt [INFORMATION]: CPT is discrete
makecpt [DEBUG]: Object ID 1 : Registered CPT Memory Reference 563ec8296c40 as an Input resource with geometry Volume [n_objects = 2]
makecpt [DEBUG]: Successfully created a new CPT container
makecpt [DEBUG]: Object ID 2 : Registered CPT Stream 7fabf6ed7760 as an Output resource with geometry Volume [n_objects = 3]
makecpt [DEBUG]: gmtapi_begin_io: Output resource access is now enabled [container]
makecpt [DEBUG]: gmtapi_export_palette: Passed ID = 2 and mode = 0
makecpt [INFORMATION]: Write CPT to Stream Standard output stream
makecpt [DEBUG]: Writing CPT to <stdout>
makecpt [DEBUG]: GMT_End_IO: Output resource access is now disabled
makecpt [DEBUG]: gmtlib_garbage_collection: Destroying object: C=0 A=0 ID=0 W=Input F=CPT M=File S=Used P=563ec8296a80 N=/home/runner/work/gmt/gmt/share/cpt/categorical.cpt
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt [DEBUG]: gmtlib_garbage_collection: Destroying object: C=0 A=0 ID=1 W=Input F=CPT M=Memory Reference S=Unused P=563ec8296c40 N=(null)
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt (gmtsupport_free_range): tried to free unallocated memory
makecpt [DEBUG]: GMTAPI_Garbage_Collection freed 2 memory objects
makecpt [DEBUG]: gmtlib_unregister_io: Unregistering object no 0 [n_objects = 2]
makecpt [DEBUG]: gmtlib_unregister_io: Unregistering object no 1 [n_objects = 1]
makecpt [DEBUG]: gmtlib_unregister_io: Unregistering object no 2 [n_objects = 0]
makecpt (gmtlib_free_tmp_arrays): tried to free unallocated memory
gmt [DEBUG]: Exit:  gmt_reload_settings
gmt [DEBUG]: Enter: gmtlib_plot_C_format
gmt [DEBUG]: Exit:  gmtlib_plot_C_format
gmt [DEBUG]: Enter: gmtinit_get_history
gmt [DEBUG]: Initialize FFTW with 2 threads.
gmt [DEBUG]: GMT_Create_Session initialized GMT structure
gmt [DEBUG]: Loading core GMT shared library: libgmt.so
gmt [DEBUG]: Shared Library # 0 (core). Path = libgmt.so
gmt [DEBUG]: Loading GMT plugins from: /home/runner/work/gmt/gmt/build/src/plugins
gmt [DEBUG]: Shared Library # 1 (supplements). Path = /home/runner/work/gmt/gmt/build/src/plugins/supplements.so
gmt [DEBUG]: Revised options: tridata.csv -R0/10/0/10 -Gjunk.nc -I0.05 -F"-a nearest"
gmt (gmtlib_free_tmp_arrays): tried to free unallocated memory
grdgdal [DEBUG]: History: Process -R0/10/0/10
grdgdal [DEBUG]: Look for file 0/10/0/10 in /home/runner/.gmt
grdgdal [DEBUG]: Look for file 0/10/0/10 in /home/runner/work/gmt/gmt/test/grdgdal
grdgdal [DEBUG]: Look for file 0/10/0/10 in /home/runner/.gmt/cache
grdgdal [DEBUG]: Look for file 0/10/0/10 in /home/runner/.gmt/server
grdgdal [DEBUG]: Got regular w/e/s/n for region (0/10/0/10)
grdgdal [DEBUG]: Found readable file tridata.csv
grdgdal [DEBUG]: Replace file tridata.csv with path tridata.csv
grdgdal [DEBUG]: Replace file tridata.csv with tridata.csv
grdgdal [INFORMATION]: Cartesian input grid
grdgdal [DEBUG]: Chosen boundary condition for all edges: natural
grdgdal [INFORMATION]: Cartesian input grid
grdgdal [DEBUG]: Object ID 0 : Registered Grid Memory Reference 55f46a044b10 as an Input resource with geometry Surface [n_objects = 1]
grdgdal [DEBUG]: Successfully created a new Grid container
grdgdal [DEBUG]: Found readable file tridata.csv
grdgdal [DEBUG]: Replace file tridata.csv with path tridata.csv
grdgdal [DEBUG]: Found readable file tridata.csv
grdgdal [DEBUG]: Replace file tridata.csv with path tridata.csv
grdgdal [DEBUG]: Found readable file tridata.csv
grdgdal [DEBUG]: Object ID 1 : Registered Data Table File tridata.csv as an Input resource with geometry Point|Line|Poly [n_objects = 2]
grdgdal [DEBUG]: gmtapi_begin_io: Input resource access is now enabled [container]
grdgdal [DEBUG]: gmtapi_import_dataset: Passed ID = 1 and mode = 0
grdgdal [INFORMATION]: Reading Data Table from File tridata.csv
grdgdal [DEBUG]: Found readable file tridata.csv
grdgdal [DEBUG]: Found readable file tridata.csv
grdgdal [DEBUG]: Source col types: (Number,Number,Number)
grdgdal [DEBUG]: ASCII source scanned: Numerical columns: 3, Trailing text: N, Record type: Numerical only
grdgdal [DEBUG]: GMT memory: Initialize 3 temporary column double arrays, each of length : 0
grdgdal [DEBUG]: GMT_End_IO: Input resource access is now disabled
grdgdal (gmt_free_table): tried to free unallocated memory
grdgdal [DEBUG]: GMT_Destroy_Data: freed memory for a Data Table for object 1
grdgdal [DEBUG]: gmtlib_unregister_io: Unregistering object no 1 [n_objects = 1]
grdgdal [DEBUG]: gmtlib_unregister_io: Object no 1 has non-NULL resource pointer
grdgdal [INFORMATION]: gdal options used: -ot Float32 -txe 0.000000 10.000000 -tye 0.000000 10.000000 -outsize 201 201 -a nearest -of MEM
grdgdal [DEBUG]: Object ID 2 : Registered Grid File junk.nc as an Output resource with geometry Surface [n_objects = 2]
grdgdal [DEBUG]: gmtapi_begin_io: Output resource access is now enabled [container]
grdgdal [DEBUG]: gmtapi_export_grid: Passed ID = 2 and mode = 0
grdgdal [INFORMATION]: Writing grid to file junk.nc
grdgdal [DEBUG]: region: 0 0, grid: 0 10
grdgdal [DEBUG]: -> region: 0 10, grid: 0 10
grdgdal [DEBUG]: row: 0 200, col: 0 200
grdgdal [DEBUG]: netCDF Library version: 4
grdgdal [DEBUG]: packed z-range: [0,9]
grdgdal [DEBUG]: GMT_End_IO: Output resource access is now disabled
grdgdal [DEBUG]: gmtlib_garbage_collection: Destroying object: C=0 A=0 ID=0 W=Input F=Grid M=Memory Reference S=Unused P=55f46a044b10 N=(null)
grdgdal [DEBUG]: GMTAPI_Garbage_Collection freed 1 memory objects
grdgdal [DEBUG]: gmtlib_unregister_io: Unregistering object no 0 [n_objects = 1]
grdgdal [DEBUG]: gmtlib_unregister_io: Unregistering object no 2 [n_objects = 0]
grdgdal [DEBUG]: GMT memory: Free 3 temporary column arrays, each of length : 2097152
malloc(): memory corruption
gmtest: line 57:  9725 Aborted                 (core dumped) "$@"
ERROR: gmtest:61
memtrack errors: 0
exit status: 1

@PaulWessel
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Thanks, I will see if I get the same debug memory issues here. Hopefully will have time this afternoon.

@joa-quim
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joa-quim commented Dec 5, 2020

I think we can close this guy now.

@PaulWessel PaulWessel closed this Dec 5, 2020
@seisman seisman deleted the debug-gdalnn branch December 6, 2020 06:29
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3 participants