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Remove .fastq.gz or .fq.gz from Bismark output filenames #21

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FelixKrueger opened this issue Feb 4, 2016 · 2 comments
Closed

Remove .fastq.gz or .fq.gz from Bismark output filenames #21

FelixKrueger opened this issue Feb 4, 2016 · 2 comments

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@FelixKrueger
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Because file names are getting silly long anyway.
@FelixKrueger
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File endings .fastq | .fq | .fastq.gz | .fq.gz are now removed from the output file (unless they were specified with --basename. This addresses f88d770. Happy, Simon?

@s-andrews
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Always happy :-)

From: FelixKrueger [email protected]
Reply-To: FelixKrueger/Bismark
<reply+007c7ae37d34188ab877781ab0b2eb2649f1173dd804c38892cf0000000112cc375f9
[email protected]>
Date: Friday, 5 February 2016 at 10:11
To: FelixKrueger/Bismark [email protected]
Subject: Re: [Bismark] Remove .fastq.gz or .fq.gz from Bismark output
filenames (#21)

File endings .fastq | .fq | .fastq.gz | .fq.gz are now removed from the
output file (unless they were specified with --basename. This addresses
f88d770
<f88d770cbcd0417d0dec5402b371
098a4aaac49b> . Happy, Simon?

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@FelixKrueger @s-andrews