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  1. DnaFeaturesViewer DnaFeaturesViewer Public

    👁️ Python library to plot DNA sequence features (e.g. from Genbank files)

    Python 568 90

  2. DnaChisel DnaChisel Public

    ✏️ A versatile DNA sequence optimizer

    Python 211 37

  3. Primavera Primavera Public

    🌸 Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.

    Python 33 4

  4. DnaWeaver DnaWeaver Public

    A route planner for DNA assembly

    Python 28 9

  5. DnaCauldron DnaCauldron Public

    ⚗️ Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies

    Python 49 11

  6. BandWitch BandWitch Public

    💫 Computer-aided DNA assembly validation and identification from restriction digests.

    Python 16

Repositories

Showing 10 of 70 repositories
  • EpiJinn Public

    DNA methylation and restriction

    Edinburgh-Genome-Foundry/EpiJinn’s past year of commit activity
    Python 1 GPL-3.0 0 0 0 Updated Jun 19, 2024
  • Examples Public

    Collection of Python modules and Jupyter notebook examples

    Edinburgh-Genome-Foundry/Examples’s past year of commit activity
    HTML 6 MIT 2 0 0 Updated Jun 10, 2024
  • Seq_Report Public

    Simple reporting on a set of sequences for documentation purposes

    Edinburgh-Genome-Foundry/Seq_Report’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Apr 25, 2024
  • pdf_reports Public

    📕 Python library and CSS theme to generate PDF reports from HTML/Pug

    Edinburgh-Genome-Foundry/pdf_reports’s past year of commit activity
    Python 219 MIT 39 10 0 Updated Apr 18, 2024
  • Sequeduct_demo Public

    Demonstration data for the Sequeduct pipeline

    Edinburgh-Genome-Foundry/Sequeduct_demo’s past year of commit activity
    HTML 5 1 0 0 Updated Feb 19, 2024
  • Sequeduct Public

    Sequencing analysis pipeline

    Edinburgh-Genome-Foundry/Sequeduct’s past year of commit activity
    Nextflow 10 GPL-3.0 0 2 0 Updated Feb 19, 2024
  • SnapGeneReader Public Forked from IsaacLuo/SnapGeneFileReader

    👓 Python library to parse Snapgene *.dna files to dict or biopython seqrecord.

    Edinburgh-Genome-Foundry/SnapGeneReader’s past year of commit activity
    Python 17 MIT 13 0 2 Updated Jan 22, 2024
  • DnaFeaturesViewer Public

    👁️ Python library to plot DNA sequence features (e.g. from Genbank files)

    Edinburgh-Genome-Foundry/DnaFeaturesViewer’s past year of commit activity
    Python 568 MIT 90 32 2 Updated Nov 1, 2023
  • DnaWeaver Public

    A route planner for DNA assembly

    Edinburgh-Genome-Foundry/DnaWeaver’s past year of commit activity
    Python 28 MIT 9 8 0 Updated Oct 4, 2023
  • Ediacara Public

    Python package for interpreting sequencing data of assembled DNA constructs (plasmids)

    Edinburgh-Genome-Foundry/Ediacara’s past year of commit activity
    Python 3 GPL-3.0 0 0 0 Updated Aug 24, 2023

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