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Achievement: YOLOAchievement: Pull Sharkx2

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  • arenavirus_hantavirus Public

    A repository to consolidate published research on Areanviruses and Hantaviruses in rodents.

    JavaScript 1 MIT License Updated Sep 6, 2024

  • rodent_syn Public

    HTML Creative Commons Zero v1.0 Universal Updated Sep 5, 2024

  • rodent_borne_zoonses_fig Public

    Timeline of rodent borne zoonoses figure

    R MIT License Updated Sep 3, 2024

  • lassa_sero Public

    JavaScript Creative Commons Zero v1.0 Universal Updated Aug 16, 2024

  • arenavirus_hantavirus_app Public

    An RShiny application to explore, subset and download the data extracted as part of the arenavirus_hantavirus project.

    R GNU General Public License v3.0 Updated Mar 22, 2024

  • scoping_review_app Public

    HTML Updated Feb 27, 2024

  • website_quarto Public

    HTML Updated Feb 14, 2024

  • phd_project Public

    TeX GNU General Public License v3.0 Updated Dec 29, 2023

  • data_for_gbif Public

    This repository is to clean and organise the data from a paper published on rodent trapping across West Africa.

    TeX 1 Creative Commons Zero v1.0 Universal Updated Dec 4, 2023

  • robotoolbox Public

    Forked from dickoa/robotoolbox

    An R Client for the KoBoToolbox API v2 - https://dickoa.gitlab.io/robotoolbox/

    R Other Updated Nov 24, 2023

  • chapter_4 Public

    HTML MIT License Updated Nov 4, 2023

  • Lassa_phylogeography Public

    LASV from NCBI and analysis of epitopes

    R Updated Oct 21, 2023

  • chapter_3 Public

    Planned analysis for chapter 3: Rodent trapping to explore rodent assemblage structure in Eastern Sierra Leone.

    R MIT License Updated Sep 15, 2023

  • lassa_risk Public

    A systematic review and meta-analysis of risk factors associated with exposure, infection and disease for Lassa fever

    epidemiology lassa-fever
    GNU General Public License v3.0 Updated Aug 14, 2023

  • data_for_pharos Public

    Format rodent trapping and serology data for inclusion into Pharos

    R GNU General Public License v2.0 Updated Aug 11, 2023

  • SL_lassa_ELISA Public

    R MIT License Updated Jul 17, 2023

  • SL_rodent_PCR Public

    R MIT License Updated Jun 27, 2023

  • rodent_trapping Public

    Initialising rodent trapping project

    R Updated Jun 6, 2023

  • SL_LIPS Public

    R Updated Feb 20, 2023

  • scoping_review Public

    TeX MIT License Updated Jan 21, 2023

  • chapter_5 Public

    This repository will accompany the final chapter of my thesis

    R GNU General Public License v3.0 Updated Dec 12, 2022

  • lassa_time_to_diagnosis Public

    A review of cases to estimate time to diagnosis for Lassa fever

    MIT License Updated Dec 8, 2022

  • lassa_underreporting Public

    A brief analysis to understand the expected number of Lassa fever cases derived from mortality data.

    epidemiology lassa-fever underreporting
    TeX MIT License Updated Nov 29, 2022

  • lassa_modelling Public

    Chapter 5

    Creative Commons Zero v1.0 Universal Updated Sep 30, 2022

  • academic_distill Public

    This is my new personal website. I migrated from HuGo to allow me to directly incorporate rmd files.

    HTML MIT License Updated Sep 18, 2022

  • extended_rodent_trapping Public

    This contains the analysis that was previously included in the rodent_trapping repository but has since been reduced to only cleaning.

    HTML Updated Aug 31, 2022

  • PPR Public

    Repository for PPR assay systematic review

    R MIT License Updated Jul 25, 2022

  • shrew_classification Public

    To test the model for shrew classification on data from BNITM

    R MIT License Updated Jul 6, 2022

  • mastomys_distribution Public

    Species distribution modelling for Mastomys natalensis

    R Creative Commons Zero v1.0 Universal Updated May 19, 2022

  • embarcadero Public

    Forked from cjcarlson/embarcadero

    🌲🌉 Species distribution models with Bayesian additive regression trees

    R Updated Mar 23, 2022