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Difficulties in installing Jovian helper environment
good first issue
Good for newcomers
help wanted
Extra attention is needed
#177
opened Jun 24, 2022 by
tengfei-emory
Improvement: change to mimimap2 aligner in ILM-RA workflow
enhancement
New feature or request
#159
opened Sep 2, 2020 by
DennisSchmitz
In IGV, "Unsatisfiable Range" error is thrown
wontfix
This will not be worked on
#158
opened Sep 2, 2020 by
DennisSchmitz
FAQ: SPAdes, and thus Jovian, is only comparable across systems/installations if the same amount of threads are used for assembly.
faq
Frequently asked question
wontfix
This will not be worked on
#145
opened May 18, 2020 by
DennisSchmitz
FAQ: LoFreq gives error "OSError: [Errno 7] Argument list too long: Frequently asked question
wontfix
This will not be worked on
lofreq
faq
#143
opened May 8, 2020 by
DennisSchmitz
Automate the detection and configuration of local and remote system resources
enhancement
New feature or request
#127
opened Mar 11, 2020 by
florianzwagemaker
Fragment_length_analysis step crashes on low-quality/low-abundance samples
bug
Something isn't working
#117
opened Feb 6, 2020 by
DennisSchmitz
'grid' mode does not seem to work with Open Grid Scheduler
clarification needed
Clarify something in the code or the README
#105
opened Nov 6, 2019 by
samnooij
SNP_calling rule crashes for samples with more than 131072 contigs per sample due to a limitation in LoFreq
bug
Something isn't working
wontfix
This will not be worked on
#102
opened Oct 25, 2019 by
DennisSchmitz
Enhancement: scaffolds ends are sometimes of poor quality
enhancement
New feature or request
#101
opened Oct 18, 2019 by
DennisSchmitz
Add functional annotations to the gff files.
enhancement
New feature or request
#74
opened Jul 5, 2019 by
thierryjanssens
Use codon usage information to infer host
enhancement
New feature or request
help wanted
Extra attention is needed
#23
opened Apr 17, 2019 by
DennisSchmitz
MultiQC: confusing values
bug
Something isn't working
help wanted
Extra attention is needed
#21
opened Apr 10, 2019 by
DennisSchmitz
Addition of PostgreSQL and individual tables in order to collect data from all Jovian runs
enhancement
New feature or request
#1
opened Apr 1, 2019 by
DennisSchmitz
ProTip!
no:milestone will show everything without a milestone.