Stars
Concordance and contamination estimator for tumorโnormal pairs
fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn that is one smart wine guy"
Rust library for walking directories recursively.
AstroNvim is an aesthetic and feature-rich neovim config that is extensible and easy to use with a great set of plugins
๐ Parameterize, execute, and analyze notebooks
Automated property based testing for Rust (with shrinking).
Rust implementation of a fast, easy, interval tree library nim-lapper
Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA
Vim-fork focused on extensibility and usability
๐ LunarVim is an IDE layer for Neovim. Completely free and community driven.
A Neovim plugin to copy text through SSH with OSC52
A quality control tool for FASTQ files written in rust
Bam Error Stats Tool (best): analysis of error types in aligned reads.
Empowering everyone to build reliable and efficient software.
Dataframes powered by a multithreaded, vectorized query engine, written in Rust
์ด๋ ํ๋ซํผ์์๋ ์ฌ์ฉํ ์ ์๋ system-ui ๋์ฒด ๊ธ๊ผด | A system-ui alternative font for all cross-platform
Learn to write Rust procedural macrosโโ[Rust Latam conference, Montevideo Uruguay, March 2019]
DeepConsensus uses gap-aware sequence transformers to correct errors in Pacific Biosciences (PacBio) Circular Consensus Sequencing (CCS) data.
This is the Rust course used by the Android team at Google. It provides you the material to quickly teach Rust.
[WORK IN PROGRESS]: Pysam2 is a module for Python 3.6 or newer for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib v2 C-API, the same one that powers samtooโฆ
This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.