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VCF visualization interface
HTML 148 45
Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer
Python 44 17
Forked from nf-core/raredisease
CG's rare disease pipeline in next flow, see the main repo here 👇
Nextflow 5 1
Mutation Identification Pipeline. Read the latest documentation:
Perl 42 10
Microbial Sequence Analysis and Loci-based Typing pipeline for use on NGS WGS data.
Python 2 3
Microbial Utility Toolbox And wrapper for data traNsmission and Transformation
Python 1
Glue between Clinical Genomics apps
Small reference files
Persistent coverage analysis tool using the d4 format
Keep track of and manage analyses
Communication layer between CG and the pipelines.
Compress fastq files with spring and check the integrity
An open source recipe book from the awesome staff of Clinical Genomics
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