Removed kamap #10
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Removed kamap #10
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Removed kamap segmentation that was introduced in 2019 as alternative to the SPM unified segmentation but never really used. Removed the cat_main_kamap functions and its calls from cat_main[1639], cat_main_updateSPM[1639], cat_main_reportstring, and the definition of the extopts.segmentation.spm_kamap parameter from cat_conf_extopts and standalone scripts. Keep the enhanced cleanup option in cat_main_clean_gwc[1639] as it is also used for T2/PD images.
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MRF für Amap würde ich trotzdem behalten und wird eben einfach immer auf 0 gesetzt...
… Am 21.11.2023 um 13:07 schrieb Robert ***@***.***>:
Removed kamap segmentation that was introduced in 2019 as alternative to the SPM unified segmentation but never really used. Removed the cat_main_kamap functions and its calls from cat_main[1639], cat_main_updateSPM[1639], cat_main_reportstring, and the definition of the extopts.segmentation.spm_kamap parameter from cat_conf_extopts and standalone scripts. Keep the enhanced cleanup option in cat_main_clean_gwc[1639] as it is also used for T2/PD images.
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#10
Commit Summary
• ddd64e1 Removed kamap
File Changes
(14 files)
• M batches/cat12_postmortem.m (1)
• M cat_conf_extopts.m (50)
• M cat_defaults.m (1)
• M cat_main.m (22)
• M cat_main1639.m (22)
• M cat_main_clean_gwc.m (6)
• M cat_main_clean_gwc1639.m (7)
• D cat_main_kamap.m (284)
• M cat_main_reportstr.m (28)
• M cat_main_updateSPM.m (15)
• M cat_main_updateSPM1639.m (15)
• M standalone/cat_standalone_segment.m (3)
• M standalone/cat_standalone_segment_enigma.m (3)
• M standalone/cat_standalone_segment_long.m (1)
Patch Links:
• https://github.com/ChristianGaser/cat12/pull/10.patch
• https://github.com/ChristianGaser/cat12/pull/10.diff
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The MRF AMAP parameter is not related to these parameter/function. I also ran additional testes SPM and CAT restarts (default+expert+developer) and cross-sectional segmented a 2 mm image to test changes in the CAT report. |
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Removed kamap segmentation that was introduced in 2019 as alternative to the SPM unified segmentation but never really used. Removed the cat_main_kamap functions and its calls from cat_main[1639], cat_main_updateSPM[1639], cat_main_reportstring, and the definition of the extopts.segmentation.spm_kamap parameter from cat_conf_extopts and standalone scripts. Keep the enhanced cleanup option in cat_main_clean_gwc[1639] as it is also used for T2/PD images.