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@CellProfiler

CellProfiler

Software for quantitative analysis of biological images

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  1. CellProfiler CellProfiler Public

    An open-source application for biological image analysis

    Python 888 372

  2. CellProfiler-plugins CellProfiler-plugins Public

    Community-contributed and experimental CellProfiler modules.

    Python 54 66

  3. CellProfiler-Analyst CellProfiler-Analyst Public

    Open-source software for exploring and analyzing large, high-dimensional image-derived data.

    Python 142 73

  4. tutorials tutorials Public

    CellProfiler tutorial pipelines and images

    Jupyter Notebook 79 86

  5. examples examples Public

    Example CellProfiler pipelines.

    Makefile 9 14

Repositories

Showing 10 of 30 repositories
  • CellProfiler Public

    An open-source application for biological image analysis

    CellProfiler/CellProfiler’s past year of commit activity
    Python 888 372 304 21 Updated Jul 23, 2024
  • core Public

    Core classes and components used by CellProfiler

    CellProfiler/core’s past year of commit activity
    Python 5 24 0 1 Updated Jul 23, 2024
  • CellProfiler-plugins Public

    Community-contributed and experimental CellProfiler modules.

    CellProfiler/CellProfiler-plugins’s past year of commit activity
    Python 54 66 24 11 Updated Jul 23, 2024
  • centrosome Public

    An open source image processing library

    CellProfiler/centrosome’s past year of commit activity
    Python 17 35 29 1 Updated Jul 22, 2024
  • tutorials Public

    CellProfiler tutorial pipelines and images

    CellProfiler/tutorials’s past year of commit activity
    Jupyter Notebook 79 BSD-3-Clause 86 3 0 Updated May 24, 2024
  • CellProfiler-Analyst Public

    Open-source software for exploring and analyzing large, high-dimensional image-derived data.

    CellProfiler/CellProfiler-Analyst’s past year of commit activity
    Python 142 73 70 4 Updated Mar 12, 2024
  • python-bioformats Public

    Read and write life sciences file formats

    CellProfiler/python-bioformats’s past year of commit activity
    Python 126 45 68 8 Updated Jan 17, 2024
  • CellProfiler-Explorer Public

    Web app for exploring CellProfiler data and combining with metadata

    CellProfiler/CellProfiler-Explorer’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Dec 20, 2023
  • distribution Public archive

    Everything needed to build CellProfiler for your favorite environment.

    CellProfiler/distribution’s past year of commit activity
    Python 4 6 13 0 Updated Oct 23, 2023
  • python-javabridge Public Forked from LeeKamentsky/python-javabridge

    Python wrapper for the Java Native Interface

    CellProfiler/python-javabridge’s past year of commit activity
    Python 21 62 8 4 Updated Aug 15, 2023
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