Skip to content
@CamaraLab

Cámara Lab

The Cámara lab focuses on the development and application of innovative computational approaches to the study of cellular heterogeneity and its role in disease.

Popular repositories Loading

  1. scTDA scTDA Public

    An object oriented python library for topological data analysis of high-throughput single-cell RNA-seq data

    Python 49 21

  2. STvEA STvEA Public

    Spatially-resolved Transcriptomics via Epitope Anchoring

    R 16 4

  3. CAJAL CAJAL Public

    A Python package using Gromov-Wasserstein distance to compare cell shapes

    Python 13 3

  4. RayleighSelection RayleighSelection Public

    An R package for feature selection in topological spaces.

    R 10 3

  5. TDA-TCGA TDA-TCGA Public

    R package for the identification of cancer-associated mutated genes using gene expression and mutation data.

    R 8 5

  6. ConDecon ConDecon Public

    R package: ConDecon is a clustering-independent deconvolution method for estimating cell abundances in bulk tissues using single-cell RNA-seq data.

    R 8

Repositories

Showing 10 of 11 repositories
  • ImmunoPheno Public
    CamaraLab/ImmunoPheno’s past year of commit activity
    0 MIT 0 0 0 Updated Jul 3, 2024
  • ConDecon Public

    R package: ConDecon is a clustering-independent deconvolution method for estimating cell abundances in bulk tissues using single-cell RNA-seq data.

    CamaraLab/ConDecon’s past year of commit activity
    R 8 MIT 0 0 0 Updated Jul 1, 2024
  • CAJAL Public

    A Python package using Gromov-Wasserstein distance to compare cell shapes

    CamaraLab/CAJAL’s past year of commit activity
    Python 13 MIT 3 0 0 Updated Jun 20, 2024
  • STvEA Public

    Spatially-resolved Transcriptomics via Epitope Anchoring

    CamaraLab/STvEA’s past year of commit activity
    R 16 GPL-3.0 4 1 0 Updated Apr 1, 2024
  • moduli Public Forked from ArturSaturnino/moduli
    CamaraLab/moduli’s past year of commit activity
    R 0 1 0 0 Updated Oct 26, 2022
  • EPN_Classifier Public

    EPNClassifier assigns ependymal tumors profiled by bulk transcriptomics (RNA-seq or microarrays) into molecular subgroups.

    CamaraLab/EPN_Classifier’s past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Jun 2, 2022
  • TDA-TCGA Public

    R package for the identification of cancer-associated mutated genes using gene expression and mutation data.

    CamaraLab/TDA-TCGA’s past year of commit activity
    R 8 GPL-3.0 5 0 0 Updated Oct 29, 2021
  • RayleighSelection Public

    An R package for feature selection in topological spaces.

    CamaraLab/RayleighSelection’s past year of commit activity
    R 10 MIT 3 0 0 Updated Aug 12, 2021
  • AdjacencyScore Public

    R package assessing co-localization of features in a graph

    CamaraLab/AdjacencyScore’s past year of commit activity
    R 1 0 0 0 Updated May 19, 2021
  • scTDA Public

    An object oriented python library for topological data analysis of high-throughput single-cell RNA-seq data

    CamaraLab/scTDA’s past year of commit activity
    Python 49 GPL-3.0 21 4 1 Updated Jul 12, 2018
View all repositories

Top languages

Loading…

Most used topics

Loading…