This repository contains data and script to repeat the reported analysis. It contains the following:
facility.txt
report.txt
Raw data files downloaded from the USDA's Animal Care Information System database on May 13, 2015.facility.json
report.json
Files to process/clean the data above using Open Refine. Load each.txt
file as a new project, select theUndo/Redo
tab, click theApply
button and then paste the content of the corresponding.json
file into theApply Operation History
box. ClickPerform Operations
and the data will be processed to edit field headings, and ensure that entries for primates are labelled consistently asNONHUMAN PRIMATES
in the fieldcol_a
. Then export the data from each project as a tab-separated text file.facility.tsv
report.tsv
Processed/cleaned versions of the data, exported from Open Refine.primates.r
R script to repeat the analysis reported in the article, using the processed/cleaned data. The script will generate a static version of the published interactive chart.