To see geneXtendeR
in action (and why you may want to use it as part of your next ChIP-seq workflow), see Section 1 of the vignette.
You can install the current GitHub version using the devtools package:
if (!require("devtools")) install.packages("devtools")
devtools::install_github("Bohdan-Khomtchouk/geneXtendeR")
And then load the package:
library(geneXtendeR)
geneXtendeR
can be found at: https://bioconductor.org/packages/geneXtendeR/. This URL will redirect to the release landing page of the package and is the URL that should be used (in publications, etc.) to refer to geneXtendeR
. You can also refer specifically to the development, release, or specific numbered version of Bioconductor:
https://bioconductor.org/packages/devel/geneXtendeR/
https://bioconductor.org/packages/release/geneXtendeR/
https://bioconductor.org/packages/3.8/geneXtendeR/
## try https:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("geneXtendeR")
Khomtchouk BB, Koehler WC, Van Booven DJ, Wahlestedt C: "Optimized functional annotation of ChIP-seq data." F1000Research. 2019, 8(612): https://doi.org/10.12688/f1000research.18966.1