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BioFriends

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  1. AzureTRE AzureTRE Public

    Forked from microsoft/AzureTRE

    An accelerator to help organizations build Trusted Research Environments on Azure.

    Python

  2. AzureTRE-Deployment AzureTRE-Deployment Public template

    Forked from microsoft/AzureTRE-Deployment

    Shell

  3. nf-core.github.io nf-core.github.io Public

    Forked from nf-core/nf-core.github.io

    Now replaced with a new website >>>

    Ruby

  4. cookiecutter cookiecutter Public

    Forked from nf-core/cookiecutter

    DEPRECIATED! Please use nf-core/tools instead

    Nextflow

  5. exoseq exoseq Public

    Forked from nf-core/exoseq

    Please consider using/contributing to https://github.com/nf-core/sarek

    Nextflow

  6. vipr vipr Public

    Forked from nf-core/vipr

    Assembly and intrahost / low-frequency variant calling for viral samples

    Nextflow

Repositories

Showing 10 of 122 repositories
  • modules Public Forked from nf-core/modules

    Repository to host tool-specific module files for the Nextflow DSL2 community!

    BioFriends/modules’s past year of commit activity
    Nextflow 0 MIT 673 0 0 Updated Feb 26, 2024
  • rnaseq Public Forked from nf-core/rnaseq

    RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

    BioFriends/rnaseq’s past year of commit activity
    Nextflow 0 MIT 685 0 0 Updated Feb 26, 2024
  • scrnaseq Public Forked from nf-core/scrnaseq

    A single-cell RNAseq pipeline for 10X genomics data

    BioFriends/scrnaseq’s past year of commit activity
    Nextflow 0 MIT 167 0 0 Updated Feb 26, 2024
  • epitopeprediction Public Forked from nf-core/epitopeprediction

    A bioinformatics best-practice analysis pipeline for epitope prediction and annotation

    BioFriends/epitopeprediction’s past year of commit activity
    Nextflow 0 MIT 23 0 0 Updated Feb 26, 2024
  • tools Public Forked from nf-core/tools

    Python package with helper tools for the nf-core community.

    BioFriends/tools’s past year of commit activity
    Python 0 MIT 186 0 0 Updated Feb 26, 2024
  • datasync Public Forked from nf-core/datasync

    nf-core/datasync is a system operation pipeline that provides several workflows for handling system operation / automation tasks

    BioFriends/datasync’s past year of commit activity
    Nextflow 0 MIT 3 0 0 Updated Feb 26, 2024
  • riboseq Public Forked from nf-core/riboseq

    Pipeline for the analysis of ribosome profiling, or Ribo-Seq (also named ribosome footprinting) data.

    BioFriends/riboseq’s past year of commit activity
    Nextflow 0 MIT 4 0 0 Updated Feb 26, 2024
  • website Public Forked from nf-core/website

    Code and files for the main nf-core website.

    BioFriends/website’s past year of commit activity
    Astro 0 MIT 182 0 0 Updated Feb 26, 2024
  • sarek Public Forked from nf-core/sarek

    Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

    BioFriends/sarek’s past year of commit activity
    Nextflow 0 MIT 394 0 0 Updated Feb 26, 2024
  • vscode-extensionpack Public Forked from nf-core/vscode-extensionpack

    A VSCode extension pack for nf-core developers.

    BioFriends/vscode-extensionpack’s past year of commit activity
    0 MIT 6 0 0 Updated Feb 25, 2024
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