Single-sequence protein-RNA complex structure prediction with biological language models

The landscape of RNA 3D structure modeling with transformer networks

locality-aware invariant Point Attention-based RNA ScorEr

pLM-informed E(3) equivariant deep graph neural networks for protein-nucleic acid binding site prediction

CASP15 performance benchmarking of the state-of-the-art protein structure prediction methods

E(3) equivariant graph neural network for PPI site prediction

Protein-protein interface quality estimation by deep graph learning

Protein contact map quality estimation by evolutionary reconciliation

Superposition-based Protein Embedded CA SC score

Distance- and orientation-based Covariational threadER