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AspirinCode authored Apr 7, 2024
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Expand Up @@ -704,6 +704,10 @@ Jieyu Jin, Dong Wang, Guqin Shi, Jingxiao Bao, Jike Wang, Haotian Zhang, Peichen
### Transformer-based


* **DockingGA: enhancing targeted molecule generation using transformer neural network and genetic algorithm with docking simulation** [2024]
Changnan Gao, Wenjie Bao, Shuang Wang, Jianyang Zheng, Lulu Wang, Yongqi Ren, Linfang Jiao, Jianmin Wang, Xun Wang.
[Briefings in Functional Genomics (2024)](https://doi.org/10.1093/bfgp/elae011) | [code](https://github.com/Chinafor/DockingGA)

* **Gotta be SAFE: A New Framework for Molecular Design** [2024]
Noutahi, Emmanuel, Cristian Gabellini, Michael Craig, Jonathan SC Lim, and Prudencio Tossou.
[Digital Discovery (2024)](https://doi.org/10.1039/D4DD00019F) | [arXiv:2310.10773 (2023)](https://arxiv.org/abs/2310.10773) | [code](https://github.com/datamol-io/safe)
Expand Down Expand Up @@ -1935,6 +1939,10 @@ Ishida, Shoichi, Tanuj Aasawat, Masato Sumita, Michio Katouda, Tatsuya Yoshizawa
### Genetic Algorithm-based


* **DockingGA: enhancing targeted molecule generation using transformer neural network and genetic algorithm with docking simulation** [2024]
Changnan Gao, Wenjie Bao, Shuang Wang, Jianyang Zheng, Lulu Wang, Yongqi Ren, Linfang Jiao, Jianmin Wang, Xun Wang.
[Briefings in Functional Genomics (2024)](https://doi.org/10.1093/bfgp/elae011) | [code](https://github.com/Chinafor/DockingGA)

* **Enhancing molecular design efficiency: Uniting language models and generative networks with genetic algorithms** [2024]
Bhowmik, Debsindhu, Pei Zhang, Zachary Fox, Stephan Irle, and John Gounley.
[Patterns (2024)](https://doi.org/10.1016/j.patter.2024.100947) | [code](https://zenodo.org/records/8387351)
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