Code accompanying: Zarkali et al.Organisational and neuromodulatory underpinnings of structural-functional connectivity decoupling in patients with Parkinson’s disease.
Usage:
-
Supplementary Data: Contains necessary processed data to replicate all images presented in the related paper.
-
SCFC.ipynb: Jupyter notebook containing relevant code to calculate structure-function coupling scores per connection.
-
CorticalGradients.ipynb: Jupyter notebook containing relevant code to derive structural and functional cortical gradients.
-
Analyses.ipynb: Jupyter notebook containing relevant code to perform analyses described in the related paper.
-
PermutationNotes.md: Code to perform spin permutations in R.
Feel free to use any of the data and/or code; please consider citing our paper if you do so. If you have any questions regarding this repo not covered in our paper, please email [email protected].