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@AllenNeuralDynamics

Allen Institute for Neural Dynamics

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  1. aind-data-schema aind-data-schema Public

    A library that defines AIND data schema and validates JSON.

    Python 19 13

  2. aind-ephys-spikesort-kilosort25-full aind-ephys-spikesort-kilosort25-full Public

    CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.

    Python 11 3

  3. TigerASI TigerASI Public

    a lightweight python interface for ASI brand Tiger Controllers

    Python 5 2

  4. dynamic-foraging-task dynamic-foraging-task Public

    Bonsai/Harp workflow for Dynamic Foraging with Python GUI for visualization and control

    Python 5 4

  5. exa-spim-hardware exa-spim-hardware Public

    5

  6. parallax parallax Public

    GUI control software for the Modular Insertion System (MIS)

    Python 4 1

Repositories

Showing 10 of 203 repositories
  • aind-metadata-upgrader Public

    Upgrade JSON metadata from old versions of aind-data-schema

    AllenNeuralDynamics/aind-metadata-upgrader’s past year of commit activity
    Python 0 MIT 0 2 2 Updated Jul 12, 2024
  • aind-metadata-mapper Public

    Repository to help gather and map metadata from different sources

    AllenNeuralDynamics/aind-metadata-mapper’s past year of commit activity
    Python 0 MIT 1 8 3 Updated Jul 12, 2024
  • aind-slims-api Public

    AIND-specific access to data stored in SLIMS

    AllenNeuralDynamics/aind-slims-api’s past year of commit activity
    Python 0 MIT 1 5 2 Updated Jul 12, 2024
  • dynamic-foraging-task Public

    Bonsai/Harp workflow for Dynamic Foraging with Python GUI for visualization and control

    AllenNeuralDynamics/dynamic-foraging-task’s past year of commit activity
    Python 5 MIT 4 70 (2 issues need help) 5 Updated Jul 12, 2024
  • aind-data-transfer-models Public

    Repository for data models used in aind-data-transfer-service

    AllenNeuralDynamics/aind-data-transfer-models’s past year of commit activity
    Python 0 MIT 0 0 1 Updated Jul 12, 2024
  • Aind.Behavior.VrForaging.Analysis Public

    A repository with analysis code for the aind-vr-foraging experiment

    AllenNeuralDynamics/Aind.Behavior.VrForaging.Analysis’s past year of commit activity
    Jupyter Notebook 0 MIT 0 1 0 Updated Jul 12, 2024
  • aind-data-access-api Public

    Library to interface with AIND databases

    AllenNeuralDynamics/aind-data-access-api’s past year of commit activity
    Python 1 MIT 0 11 2 Updated Jul 11, 2024
  • Bonsai.AllenNeuralDynamics Public

    A Bonsai package for version control and manipulation of Git repositories

    AllenNeuralDynamics/Bonsai.AllenNeuralDynamics’s past year of commit activity
    C# 0 0 6 1 Updated Jul 11, 2024
  • aind-metadata-service Public

    Service to retrieve Labtracks/Sharepoint info using a REST API

    AllenNeuralDynamics/aind-metadata-service’s past year of commit activity
    Python 3 MIT 1 15 1 Updated Jul 11, 2024
  • aind-spot-get-multichannel Public

    Repository that takes the spots from a single channel and obtains statistics from other channels

    AllenNeuralDynamics/aind-spot-get-multichannel’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jul 11, 2024
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