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@AlexanderLabWHOI

Alexander Lab @ WHOI

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  1. EukHeist EukHeist Public

    Jupyter Notebook 23 5

  2. eukrhythmic eukrhythmic Public

    A metatranscriptomic pipeline optimized for the study of microeukaryotes.

    Python 15 3

  3. EUKulele EUKulele Public

    Automatic eukaryotic taxonomic classification

    Python 28 7

Repositories

Showing 10 of 37 repositories
  • EUKulele Public

    Automatic eukaryotic taxonomic classification

    AlexanderLabWHOI/EUKulele’s past year of commit activity
    Python 28 MIT 7 23 0 Updated Sep 25, 2024
  • AlexanderLabWHOI.github.io Public

    Alexander Lab at Woods Hole Oceanographic Institution

    AlexanderLabWHOI/AlexanderLabWHOI.github.io’s past year of commit activity
    HTML 0 0 0 0 Updated Sep 24, 2024
  • eukrhythmic Public

    A metatranscriptomic pipeline optimized for the study of microeukaryotes.

    AlexanderLabWHOI/eukrhythmic’s past year of commit activity
    Python 15 MIT 3 18 3 Updated Sep 11, 2024
  • 2024-Krinos-Ghux-Darwin Public

    Code for Krinos et al. G. huxleyi vital rates paper with Darwin model analysis

    AlexanderLabWHOI/2024-Krinos-Ghux-Darwin’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Jun 20, 2024
  • academic-kickstart Public Forked from HugoBlox/theme-academic-cv

    Easily create a beautiful website using Academic and Hugo

    AlexanderLabWHOI/academic-kickstart’s past year of commit activity
    TeX 2 MIT 6,354 0 0 Updated May 22, 2024
  • 2023-euk-diversity Public Forked from akrinos/2023-euk-diversity

    Clean version of repo for 2023 "euk-diversity" paper on taxonomic annotation of meta-omic sequences

    AlexanderLabWHOI/2023-euk-diversity’s past year of commit activity
    Jupyter Notebook 0 MIT 1 0 0 Updated Aug 21, 2023
  • ehux_assembly_stats Public
    AlexanderLabWHOI/ehux_assembly_stats’s past year of commit activity
    Shell 0 0 0 0 Updated Aug 1, 2023
  • EukHeist Public
    AlexanderLabWHOI/EukHeist’s past year of commit activity
    Jupyter Notebook 23 MIT 5 1 0 Updated Jun 20, 2023
  • jEUKebox Public

    Simulating microbial eukaryote communities to validate metatranscriptome assembly approaches.

    AlexanderLabWHOI/jEUKebox’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Nov 7, 2022
  • tara-download-snakemake Public
    AlexanderLabWHOI/tara-download-snakemake’s past year of commit activity
    Python 0 0 0 0 Updated May 18, 2022
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