Update ReadMe.md

Akmazad · Sep 25, 2020 · d8604bd · d8604bd
1 parent 1c53377
commit d8604bd
Showing 1 changed file with 1 addition and 2 deletions.
diff --git a/Data Processing/Psychencode_June2019/Single Label-based exp/ReadMe.md b/Data Processing/Psychencode_June2019/Single Label-based exp/ReadMe.md
@@ -54,7 +54,6 @@ sort -k 1,1 -k2,2n mergedPeakHeightMatrix_HumanFC_filtered_single_label.overlaps
 # for saving non-zero binInfo
 awk -F '\t' ' {for(i=5; i<=NF; i++) if ($i != -1) {print $1"\t"$2"\t"$3"\t"$4"\t"$5; break;} }' mergedPeakHeightMatrix_HumanFC_filtered_single_label.overlaps.dropped.fixed.filtered.sorted.bed > HumanFC_single_label_nonZero.binInfo.bed
 ```
-## fix the bins ending when it goes beyond the refWidth
 
 ## Extract DNA sequences
 ```r
@@ -76,7 +75,7 @@ seq <- getSeq(hg, bins$chr, start = bins$start - flankingLength, end = bins$end
 seq <- as.character(as.data.frame(seq)[[1]])
 bins.seq <- cbind(bins,seq)
 colnames(bins.seq) <- c(colnames(bins),"dna.seq")
-fwrite(bins.seq, file="HumanFC_single_label.bin.Seq.bed", sep="\t", row.names=F, quote=F)
+fwrite(bins.seq, file="HumanFC_single_label.bin.Seq_Labels.bed", sep="\t", row.names=F, quote=F)
 ```
 
 ################## End of data-processing Pipeline ##############