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Update ReadMe.md
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Akmazad committed Sep 25, 2020
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Expand Up @@ -12,3 +12,8 @@ Next, we need to intersect each peaks with chromosomal bins of fixed-width. Foll
intersectBed -wao -f 0.05 -a hg19_bins_200bp.bed -b mergedPeakHeightMatrix_HumanFC_filtered_signle_label.BED > mergedPeakHeightMatrix_HumanFC_filtered_signle_label.overlaps.bed
```

## Post-processing
- We need to drop few information that aren't relevant (comes from peaks' binIDs after [```intersectBed -wao```](https://bedtools.readthedocs.io/en/latest/content/tools/intersect.html)).
```sh
cut -f1-4,9-10 mergedPeakHeightMatrix_HumanFC_filtered_signle_label.overlaps.bed > mergedPeakHeightMatrix_HumanFC_filtered_signle_label.overlaps.dropped.bed
```

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