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Update README.md
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Akmazad committed Sep 14, 2020
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2 changes: 1 addition & 1 deletion Data Processing/Psychencode_June2019/README.md
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Expand Up @@ -39,7 +39,7 @@ Next, we need to intersect each peaks with chromosomal bins of fixed-width. Foll
```sh
intersectBed -wao -f 0.05 -a hg19_bins_200bp.bed -b mergedPeakHeightMatrix_HumanFC_filtered.bed > mergedPeakHeightMatrix_HumanFC_filtered.overlaps.bed
intersectBed -wao -f 0.05 -a hg19_bins_200bp.bed -b mergedPeakHeightMatrix_EpiMap_filtered.bed > mergedPeakHeightMatrix_EpiMap_filtered.overlaps.bed
intersectBed -wao -f 0.05 -a hg19_bins_200bp.bed -b Brain_CagePeaks_filtered.BED > Brain_CagePeaks_filtered.overlaps.bed
intersectBed -wao -f 0.05 -a hg19_bins_200bp.bed -b Brain_CagePeaks_filtered.bed > Brain_CagePeaks_filtered.overlaps.bed
```
## Post-processing
- We need to drop few information that aren't relevant (comes from peaks' binIDs after [```intersectBed -wao```](https://bedtools.readthedocs.io/en/latest/content/tools/intersect.html)).
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