bf-knn implements a brute-force approach for finding k-nearest neighbors on the GPU for many queries in parallel. It takes advantage of recent advances in fundamental GPU computing primitives. The squared Euclidean distances between queries and references are calculated by a CUDA kernel modified from a matrix multiplication subroutine in the MAGMA library. The nearest neighbors selection is accomplished by a truncated merge sort built on top of sorting and merging functions in the Modern GPU library. Compared to state-of-the-art approaches, bf-knn is faster and handles larger inputs.
Shengren Li and Nina Amenta. Brute-Force k-Nearest Neighbors Search on the GPU. Similarity Search and Applications 2015.
Instructions to download bf-knn and compile the demo:
git clone [email protected]:NVlabs/moderngpu.git
git clone [email protected]:geomlab-ucd/bf-knn.git
cd bf-knn
nvcc -arch=sm_21 -I ../moderngpu/include/ bf_knn_device.cu bf_knn_host.cu demo.cc -o bf-knn-demo