Simple fasta exploration and manipulation
To install it, simply enter the following command in R:
devtools::install_github('A-BN/fastaUtils')or in your terminal:
Rscript --slave -e "devtools::install_github('A-BN/fastaUtils')"You can use it in R console or directly in your terminal like this:
Rscript --slave -e "library(fastaUtils);
fastaUtils::fastanalyze(fasta = 'path/to/your/file.fasta',
metrics = TRUE,
plot = TRUE,
verbose = TRUE)"