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Apply and save color schemes in MATLAB with ease.

MATLAB 1,206 279 Updated Dec 13, 2023

Barnes-Hut t-SNE

C++ 894 240 Updated Jul 19, 2021

Shared Nearest Neighbor-based Clustering by Fast Search and Find of Density Peaks

C++ 51 18 Updated Sep 15, 2020

Use scikit algorithms from within Matlab!

MATLAB 7 Updated Jun 19, 2019

Machine learning in Matlab using scikit-learn syntax

MATLAB 28 13 Updated Oct 2, 2019

Shared Nearest Neighbor Clustering Algorithm: Implementation and Evaluation

Python 25 5 Updated Feb 5, 2020

Single-cell analysis in Python. Scales to >1M cells.

Python 1,916 598 Updated Oct 31, 2024

Advanced Normalization Tools (ANTs)

C++ 1,204 381 Updated Nov 3, 2024

Z-Brain Viewer and Analysis Scripts for MAP-Mapping

MATLAB 21 6 Updated Dec 16, 2018

Supporting code for Leung et al., 2019 (Nature)

MATLAB 1 Updated Jul 9, 2019

A Python module for accessing Hamamatsu DCIMG files

Python 14 3 Updated Jun 28, 2023

Density valley clustering (cluserdv). Matlab implementation.

MATLAB 26 11 Updated Jun 15, 2018

Python reader for NorPix .seq files

Python 4 4 Updated Jul 23, 2015

A modular package to control stimulation and track behaviour

Python 43 27 Updated Sep 15, 2024

Shared Nearest Neighbors (SNN) clustering algorithm implementation

Java 4 5 Updated Aug 26, 2015

A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA

Python 162 67 Updated Jan 10, 2024

An implementation of demixed Principal Component Analysis (a supervised linear dimensionality reduction technique)

Jupyter Notebook 279 94 Updated Jun 2, 2022

Seeded Iterative Demixing (SID) of neuronal activity recordings made using Light Field Microscopy (LFM)

MATLAB 27 7 Updated Feb 26, 2020

interactive analysis of calcium imaging data from larval zebrafish

MATLAB 134 21 Updated Jun 6, 2019