Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

various changes (WORK IN PROGRESS) #255

Merged
merged 29 commits into from
Jun 4, 2021
Merged

various changes (WORK IN PROGRESS) #255

merged 29 commits into from
Jun 4, 2021

Conversation

DavidBJaffe
Copy link
Contributor

@DavidBJaffe DavidBJaffe commented Jun 4, 2021

GUI

  • improve newline printing consistency on error exit
  • improve error handling when the server crashes
  • fix bug that prevented remote host from seeing configuration file

OTHER

  • add text explaining exact subclonotype ordering within a clonotype
  • change frequency of sweeping from once per day to once per week, and raise cap to 25 GB
  • reject BI argument unless internal run
  • for internal run, complain if no configuration file
  • shorten tracebacks by removing tokio and future stuff
  • don't allow start_release to run from a Mac
  • move weak chain filter to before the place where clonotypes are split
  • accept 0.17% increase in runtime
  • turn off code that tries to fix exit status
  • raised expected test time from 135 to 145 seconds
  • add page showing history of enclone changes that affect cellranger

@DavidBJaffe DavidBJaffe closed this Jun 4, 2021
@DavidBJaffe DavidBJaffe reopened this Jun 4, 2021
@DavidBJaffe DavidBJaffe merged commit 6358328 into master Jun 4, 2021
@DavidBJaffe DavidBJaffe deleted the dj/167 branch June 4, 2021 20:19
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant