Here are
21 public repositories
matching this topic...
Registry of containerized biosimulation tools that support a standard command-line interface
Updated
Oct 28, 2024
Python
Utilities for building standardized command-line interfaces for biosimulation software packages
Updated
Oct 15, 2024
Python
AMICI biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Apr 22, 2024
Python
Tutorials for BioSimulators
Updated
May 1, 2023
Jupyter Notebook
Python library to download and cache models from BioModels
Updated
Feb 3, 2024
Python
PySCeS biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Oct 18, 2024
Python
pyNeuroML simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Feb 22, 2022
Python
Command-line program and scheduled GitHub action for publishing the BiGG model repository to BioSimulations
Updated
Feb 1, 2024
Python
Repository of rule-based models implemented with the BioNetGen model language (BNGL) and command-line program for publishing RuleHub to BioSimulations
Updated
Apr 4, 2023
Python
MASSpy mathematical simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Oct 31, 2024
Python
OpenCOR simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Jan 3, 2022
Python
BoolNet biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Dec 14, 2021
Python
LibSBMLSim mathematical simulation program via BioSimulators-compliant command-line interface and Docker container
CBMPy biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Feb 23, 2022
Python
CBMPy biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Dec 14, 2021
Python
Summary of the technical documentation for BioSimulators
Updated
Dec 14, 2021
Python
RBApy biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Dec 14, 2021
Python
XPP mathematical simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Feb 28, 2022
Python
Command-line application for publishing the Physiome model repository of physiological models to the BioSimulations repository for simulation projects
Updated
May 16, 2022
JavaScript
GINsim biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Dec 14, 2021
Python
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