soedinglab / hh-suite Star 515 Code Issues Pull requests Remote protein homology detection suite. opensource bioinformatics cpp protein-structure simd alignment profile-search sequence-search hh-suite hhblits profile-profile-search hhsearch hhpred viterbi Updated Aug 13, 2023 C
mtisza1 / Cenote-Taker2 Star 57 Code Issues Pull requests Cenote-Taker2: Discover and Annotate Divergent Viral Contigs (Please use Cenote-Taker 3 instead) virus annotation discovery genbank hhblits hhsearch metagenomes virome virus-discovery prophage hallmark virus-evolution cenote-taker2 prophage-prediction virus-sequences cenote-unlimited-breadsticks Updated Jan 19, 2024 Shell
mircare / Brewery Star 14 Code Issues Pull requests State-of-the-art ab initio prediction of 1D protein structure annotations machine-learning deep-learning proteins protein-structure protein-sequences hhblits secondary-structure psi-blast solvent-accessible-surface-area contact-density torsion-angles Updated Feb 28, 2021 C++
mtisza1 / Cenote-Taker Star 14 Code Issues Pull requests DEPRECATED: Use Cenote-Taker 3 instead virus genome taxonomy metagenomics genbank circle genome-annotation hhblits blast orfs plasmid deprecated-repo Updated Jan 19, 2024 Shell