bacterial
Here are 16 public repositories matching this topic...
Inofficial R client for the DSMZ's Bacterial Diversity Metadatabase (former contact: @katrinleinweber). https://api.bacdive.dsmz.de/client_examples seems to be the official alternatives.
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May 28, 2022 - R
The BV-BRC Web Application
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Aug 21, 2024 - JavaScript
Computer vision in the service of bacteriology refers to the use of computer algorithms and technology to analyze and interpret images of bacteria for the purpose of identifying and characterizing different types of bacteria.
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Mar 4, 2024 - Jupyter Notebook
code used in van Raaphorst, Kjos & Veening (2017), Chromosome segregation drives division site selection in Streptococcus pneumoniae, PNAS
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Mar 5, 2018 - R
Bacterial gene duplication analysis pipeline
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Feb 27, 2022 - R
Curve Growth modeling-IPASS project
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Apr 13, 2021 - Python
Variant barcoding pipeline using single nucleotide polymorphisms (SNPs) for the generation of M. orygis standardised markers for diagnostic and epidemiological use.
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Apr 26, 2022 - R
Docker-based implementation of the Discover1.1 pipeline for bacterial characterization.
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Nov 1, 2021 - Python
Condense and summarize many results form PADLOC into CSV for heatmaps
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May 29, 2024 - Python
🔗 A simple nextflow of shovill for running multiple samples at once on multiple cores computer or HPC (i.e. slurm, sge,...)
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Mar 2, 2018
Docker-based implementation of the Discover1.1 pipeline for bacterial characterization.
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Nov 1, 2021 - Python
The BV-BRC Web Application
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Jan 11, 2024 - JavaScript
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